Gene Information

Name : lysS (MS7_0494)
Accession : YP_005756953.1
Strain : Staphylococcus aureus 11819-97
Genome accession: NC_017351
Putative virulence/resistance : Virulence
Product : lysine--tRNA ligase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 544925 - 546412 bp
Length : 1488 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGAAGAAATGAATGACCAAATGTTGGTTCGACGTCAAAAATTACAAGAATTATATGATCTTGGTATAGACCCGTT
TGGTTCTAAATTTGACCGTTCAGGTTTATCTAGTGATTTGAAAGAAGAGTGGGACCAGTATTCTAAAGAAGAATTGGTAG
AAAAAGAAGCGGATAGTCATGTCGCTATAGCTGGACGATTAATGACTAAGCGTGGTAAAGGTAAAGCAGGATTTGCACAC
GTTCAGGACTTAGCTGGACAAATTCAAATTTACGTTCGTAAAGATCAAGTTGGCGATGACGAATTTGATTTATGGAAAAA
TGCTGATTTAGGCGATATCGTTGGTGTTGAAGGTGTAATGTTCAAAACAAATACTGGCGAATTATCGGTTAAAGCGAAGA
AATTCACGCTACTAACTAAATCATTGCGACCATTACCGGATAAATTCCACGGTTTACAGGATATTGAACAGAGATATCGT
CAAAGATATTTAGATTTAATTACGAACGAAGATAGCACTCGTACATTTATTAATCGTAGTAAAATCATTCAAGAAATGCG
TAATTATTTAAATAATAAAGGTTTCTTGGAAGTAGAAACACCTATGATGCACCAAATTGCTGGTGGAGCAGCTGCTAGAC
CATTTGTAACACATCATAATGCATTAGATGCAACGTTATACATGCGTATTGCTATTGAGTTGCATTTAAAACGTTTAATT
GTCGGTGGACTTGAAAAAGTATATGAAATTGGTAGAGTATTCCGTAATGAAGGTGTATCAACTAGACATAACCCTGAATT
CACAATGATTGAATTATATGAAGCATATGCAGATTATCATGACATTATGGATTTAACAGAATCTATGGTGAGACATATTG
CCAATGAAGTATTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCAT
ATTGTTGATGCTGTAAAAGAAGCTACTGGTGTGGATTTTTATGAAGTTAAAAGTGATGAAGAAGCTAAAGCTTTAGCTAA
AGAACATGGTATTGAAATTAAAGATACAATGAAATATGGTCATATTTTAAATGAATTCTTTGAGCAAAAAGTTGAAGAAA
CACTTATTCAGCCAACGTTTATCTATGGTCATCCGACTGAAATTTCACCTTTAGCGAAGAAAAATCCTGAAGATCCTAGA
TTTACTGATCGTTTCGAATTGTTCATTGTAGGTAGAGAGCATGCAAATGCATTTACTGAATTAAATGATCCTATTGATCA
AAAAGGTCGTTTTGAAGCGCAACTTGTTGAAAAAGCGCAAGGTAATGATGAAGCGCATGAAATGGATGAAGATTACATTG
AAGCGTTAGAATATGGTATGCCTCCGACAGGTGGTCTTGGTATCGGTATTGACAGATTGGTTATGTTATTAACTGATTCT
CCATCAATCAGAGACGTGTTATTATTCCCTTATATGAGACAAAAATAA

Protein sequence :
MSEEMNDQMLVRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAH
VQDLAGQIQIYVRKDQVGDDEFDLWKNADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYR
QRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLI
VGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLH
IVDAVKEATGVDFYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPR
FTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDS
PSIRDVLLFPYMRQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 5e-120 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_005756953.1 lysine--tRNA ligase VFG1668 Protein 3e-120 50