Gene Information

Name : cadD (HMPREF0772_12680)
Accession : YP_005751280.1
Strain :
Genome accession: NC_017345
Putative virulence/resistance : Resistance
Product : cadmium resistance protein CadD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4972 - 5589 bp
Length : 618 bp
Strand : -
Note : COG: COG4300; Pfam: PF03596; InterPro: IPR004676

DNA sequence : 
ATGATTCAAACGGTTGTTGCTGCTGCTGTTCTTTATATTGCTACAGCAGTTGATTTATTAGTAATTTTATTAATATTTTT
TGCTAGAGCAAAGACTAGAAAAGAATATAGAGATATTTATGTTGGTCAATATTTAGGGTCTATTATTTTAATATTAGTTA
GTTTGTTTTTAGCTTTTGTATTAAATTATGTTCCAGAAAAGTGGATATTAGGTTTATTGGGTTTAATACCAATTTATCTT
GGAATTAAAGTGACTATTTATGATGATTGTGAAGGAGAAAAGAGAGCTAAAAAAGAATTGAATGAAAAAGGATTGTCTAA
ATTAGTTGGTACGGTTGCAATTGTTACGATAGCAAGTTGTGGCGCCGATAATATTGGTTTATTTGTTCCGTATTTTGTGA
CATTAAGTGTTACTAATTTATTACTTACTCTGTTTGTCTTTTTAATTTTAATTTTCTTCTTGGTGTTTACTGCACAAAAA
TTAGCTAATATCCCAGGAATTGGAGAAATTGTTGAGAAATTTAGTCGTTGGATTATGGCTATTATTTATATAGCTTTAGG
TTTATTTATTATTATTGAAAATGACACTATTCAAACAATTTTAGGATTTATATTTTAA

Protein sequence : 
MIQTVVAAAVLYIATAVDLLVILLIFFARAKTRKEYRDIYVGQYLGSIILILVSLFLAFVLNYVPEKWILGLLGLIPIYL
GIKVTIYDDCEGEKRAKKELNEKGLSKLVGTVAIVTIASCGADNIGLFVPYFVTLSVTNLLLTLFVFLILIFFLVFTAQK
LANIPGIGEIVEKFSRWIMAIIYIALGLFIIIENDTIQTILGFIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SERP2221 YP_189776.1 cadmium resistance family protein Not tested vSe1 Protein 3e-56 93
cadD YP_252014.1 cadmium binding protein CadD Not tested SCCmec Protein 2e-57 91
cadD YP_254238.1 cadmium binding protein CadD Not tested ¥ðSh1 Protein 7e-55 86

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadD YP_005751280.1 cadmium resistance protein CadD BAC0057 Protein 8e-60 99