Gene Information

Name : cadC (HMPREF0772_12679)
Accession : YP_005751279.1
Strain :
Genome accession: NC_017345
Putative virulence/resistance : Resistance
Product : transcriptional regulator CadC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4606 - 4953 bp
Length : 348 bp
Strand : -
Note : COG: COG0640; Pfam: PF01022; InterPro: IPR011991

DNA sequence :
ATGAGTTATGAAAATACTTGTGATGTGATCTGTGTACATGAGGATAAAGTTAACAATGCTTTAAGTTTTTTAGAAGATGA
TAAATCTAAGAAATTACTTAACATTTTAGAAAAAATTTGTGATGAGAAGAAATTGAAAATCATATTATCTTTGATTAAAG
AAGATGAGTTGTGTGTTTGTGATATTTCTTTGATATTGAAAATGAGTATTGCTTCAACTTCACATCATTTAAGGCTTTTA
TATAAAAATGAGGTACTTGATTTTTATAAAGATGGAAAGATGGCATATTATTTTATTAAAGACGATGAAATAAGAGAGTT
TTTCTCTAAAAATCATGAGGGTTTTTGA

Protein sequence :
MSYENTCDVICVHEDKVNNALSFLEDDKSKKLLNILEKICDEKKLKIILSLIKEDELCVCDISLILKMSIASTSHHLRLL
YKNEVLDFYKDGKMAYYFIKDDEIREFFSKNHEGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadC YP_189777.1 CadC family transcriptional regulator Not tested vSe1 Protein 2e-35 95
cadX YP_254239.1 cadmium efflux system accessory protein CadX Not tested ¥ðSh1 Protein 1e-32 83
cadX YP_252015.1 hypothetical protein Not tested SCCmec Protein 1e-23 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadC YP_005751279.1 transcriptional regulator CadC BAC0059 Protein 1e-14 44
cadC YP_005751279.1 transcriptional regulator CadC BAC0056 Protein 3e-12 43