Gene Information

Name : binL (HMPREF0772_12696)
Accession : YP_005751296.1
Strain :
Genome accession: NC_017345
Putative virulence/resistance : Unknown
Product : resolvase family site-specific recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 18439 - 19032 bp
Length : 594 bp
Strand : +
Note : COG: COG1961; Pfam: PF00239,PF02796; InterPro: IPR006119

DNA sequence :
TTGAAAATAGGTTATGCAAGAGTTTCAACTGGATTACAAAATTTAAATTTACAGGAGGATCGATTAAATACATATGGTTG
TGAAAAGATATTTAATGACCATATGAGTGGTTCAAAAAGTAAAAGACCTGGTTTAGATAAAGCAATTGAATTTGCGAGGT
CGGGAGATACGATTGTTGTTTGGAGATTAGATAGATTGGGACGTAATATGGAAGATTTAATCACATTAGTCAATGAACTT
AATGAGAGAGGCGTGAGTTTCCATAGCTTAGAAGAAAATATAACCATGGATAAATCAAGTTCTACAGGACAATTATTATT
TCATTTATTCGCAGCATTTGCAGAATTTGAACGTAATTTAATTTTAGAGCGTTCTTCAGCTGGCCGAATTGCAGCACGTG
CTAGAGGCCGATATGGAGGCAGACCAGAGAAATTAAATCAAAAAGATTTAAACTTACTTAAGACACTTTATGATAATGGC
ACGCCAATTAAGACAATTGCAGAACAGTGGCATGTTTCACGTACAACAATTTATCGTTACCTCAATAAATTGGAGGACAA
GGAAGATGAAAAACAAGGAGAAGTATCTAACTAA

Protein sequence :
MKIGYARVSTGLQNLNLQEDRLNTYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNEL
NERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNQKDLNLLKTLYDNG
TPIKTIAEQWHVSRTTIYRYLNKLEDKEDEKQGEVSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 4e-68 98
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 4e-68 98
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 1e-63 96
res AGK07070.1 resolvase Not tested SGI1 Protein 5e-27 54
res AAK02044.1 resolvase Not tested SGI1 Protein 5e-27 54
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 5e-27 54
res AGF34985.1 resolvase Not tested SGI1 Protein 5e-27 54
res AGF35025.1 resolvase Not tested SGI1 Protein 5e-27 54
res AGF35059.1 resolvase Not tested SGI1 Protein 5e-27 54
res AGK06929.1 resolvase Not tested SGI1 Protein 5e-27 54
res AGK06966.1 resolvase Not tested SGI1 Protein 5e-27 54
res AGK07012.1 resolvase Not tested SGI1 Protein 5e-27 54
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 6e-27 47
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 1e-18 41
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 1e-18 41
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 8e-19 41