Gene Information

Name : HMPREF0772_12688 (HMPREF0772_12688)
Accession : YP_005751288.1
Strain :
Genome accession: NC_017345
Putative virulence/resistance : Resistance
Product : ABC superfamily ATP binding cassette transporter, ABC protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 10397 - 11023 bp
Length : 627 bp
Strand : -
Note : COG: COG1136; Pfam: PF00005; InterPro: IPR003593

DNA sequence :
GTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGAATGTAATTTTAATTTTGAAAAAGG
AAAATCATATGCTTTAGTTGGAGAAAGTGGCGCTGGAAAATCTACTTTACTTAACATAATCGCTGGGTTCGAAGATGTAT
CACAAGGGAGCATATATATTGAAGATAAGTTACTAAAAAAGAAAGTCGATTTTTATAGATATACGTTAGGGTATTTGTTT
CAAAATTTTGCTTTACTTGAAAATCAAACAATCAGTCAAAATTTAGATTTAGCCCTAAAGTTCAAAAAGAATAAAAAAGA
TAATATGAACTTAAAGAAAGAAGTATTAAAAAAGGTCAGCCTAGATTTAGATATCAAGAGGATTGTTAATTCTCTAAGTG
GTGGTGAACAGCAAAGAGTTGCGTTGGCGAGACTTATATTAAAAGATCCGAAAATCATTTTAGCTGATGAACCTACTGGG
TCATTAGATACGAAAAACGGAAAAATAGTCATTGATTTATTATTAAATCTACTTGATGAAAATAAAACTATGATTGTCGT
AACACATGATTTAGATCTTGCGAAACGATTTGATGTCATAGTCAATATTTCTGAGCTTAGAAATTAA

Protein sequence :
MIKLENVFVKKGNKNILDECNFNFEKGKSYALVGESGAGKSTLLNIIAGFEDVSQGSIYIEDKLLKKKVDFYRYTLGYLF
QNFALLENQTISQNLDLALKFKKNKKDNMNLKKEVLKKVSLDLDIKRIVNSLSGGEQQRVALARLILKDPKIILADEPTG
SLDTKNGKIVIDLLLNLLDENKTMIVVTHDLDLAKRFDVIVNISELRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0772_12688 YP_005751288.1 ABC superfamily ATP binding cassette transporter, ABC protein CP003583.1.gene613.p Protein 3e-19 43