Gene Information

Name : sph (ECTR2_1875)
Accession : YP_005750568.1
Strain : Staphylococcus aureus ECT-R 2
Genome accession: NC_017343
Putative virulence/resistance : Virulence
Product : sphingomyelin phosphodiesterase
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.4.12
Position : 1994726 - 1995550 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence : 
ATGTATCCAAACTGGGGACAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAAT
ATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAATGTGAAAAAAGAATATCCTTACCAAACACCTG
TACTCGGTCGTTCTCAATCAGGTTGGGACAAAACTGAAGGTAGCTACTCATCAACTGTTGCTGAAGATGGTGGCGTAGCG
ATTGTAAGTAAATATCCTATTAAAGAAAAAATCCAGCATGTTTTCAAAAGCGGTTGTGGATTCGATAATGATAGCAACAA
AGGCTTTGTTTATACAAAAATAGAGAAAAATGGTAAGAACATTCACGTTATCGGTACACATACACAATCTGAAGATTCAC
GTTGTGGTGCTGGACATGATCGAAAAATTAGAGCTGAACAAATGAAAGAAATCAGTGACTTTGTTAAAAAGAAAAATATC
CCTAAAGATGAAACGGTATATATAGGTGGCGACCTTAATGTTAATAAAGGCACTCCAGAGTTCAAAGATATGCTTAAAAA
CTTGAATGTAAATGATGTTCTATATGCAGGTCATAATAGCACATGGGACCCTCAATCAAATTCAATTGCGAAATATAATT
ACCCTAATGGTAAACCAGAACATTTAGACTATATATTTACAGATAAAGATCATAAACAACCAAAACAATTAGTCAATGAA
GTTGTGACTGAAAAACCTAAGCCATGGGATGTATATGCGTTCCCATATTACTACGTTTACAATGATTTTTCAGATCATTA
CCCAATCAAAGCCTATAGTAAATAG

Protein sequence : 
MYPNWGQYKRADLIGQSSYIKNNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVA
IVSKYPIKEKIQHVFKSGCGFDNDSNKGFVYTKIEKNGKNIHVIGTHTQSEDSRCGAGHDRKIRAEQMKEISDFVKKKNI
PKDETVYIGGDLNVNKGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNE
VVTEKPKPWDVYAFPYYYVYNDFSDHYPIKAYSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 2e-124 99
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-123 99
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 6e-124 99
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 5e-68 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sph YP_005750568.1 sphingomyelin phosphodiesterase VFG1798 Protein 2e-126 99
sph YP_005750568.1 sphingomyelin phosphodiesterase VFG0674 Protein 3e-68 57