|
Name : hlgC (HMPREF0772_10767) Accession : YP_005746849.1 Strain : Staphylococcus aureus TCH60 Genome accession: NC_017342 Putative virulence/resistance : Virulence Product : gamma hemolysin Function : - COG functional category : - COG ID : - EC number : - Position : 842917 - 843864 bp Length : 948 bp Strand : - Note : - DNA sequence : ATGCTTAAAAATAAAATATTAGCTACAACTTTATCTGTAAGCTTACTTGCCCCTCTTGCCAATCCGTTATTAGAAAATGC TAAAGCTGCCAATGATACTGAAGACATCGGTAAAGGAAACGATGTAGAAATTATCAAAAGGACAGAAGATAAAACAAGTA ATAAATGGGGCGTGACTCAAAATATCCAATTCGACTTTGTGAAGGATAAAAAATATAACAAAGATGCTTTGATCTTAAAG ATGCAAGGATTCATTAGCTCTCGAACAACATATTATAACTATAAAAATACAAATCATATTAAATCTATGCGTTGGCCATT CCAATATAATATTGGTTTGAAAACAAATGATAAATATGTTTCTTTAATCAATTATTTACCGAAAAATAAAATTGAATCTA CAAACGTAAGTCAGACATTAGGATACAATATTGGTGGTAATTTCCAATCAGCCCCATCACTTGGTGGTAATGGATCATTT AACTATTCTAAATCGATTAGCTATACACAACAAAATTATGTAAGTGAAGTAGAACAACAAAACTCAAAAAGTGTTTTATG GGGCGTCAAAGCGAATTCATTCGCCACTGAATCAGGTCAAAAATCAGCATTTGATAGCGATTTATTTGTAGGCTACAAAC CTCATAGTAAAGATCCTAGAGATTATTTCGTTCCAGACAGCGAGTTACCACCTCTTGTACAAAGTGGATTTAACCCTTCA TTTATCGCAACAGTATCTCACGAAAAAGGTTCAAGCGACACGAGCGAATTTGAAATCACTTATGGAAGAAATATGGATGT CACTCATGCCATTAAAAGATCAACACATTATGGCAACAGTTATTTAGATGGTCACAGAGTCCATAATGCATTTAAAAATA GAAACTACACTGTGAAATATGAAGTCAATTGGAAGACTCACGAAATCAAAGTGAAAGGACAGAATTGA Protein sequence : MLKNKILATTLSVSLLAPLANPLLENAKAANDTEDIGKGNDVEIIKRTEDKTSNKWGVTQNIQFDFVKDKKYNKDALILK MQGFISSRTTYYNYKNTNHIKSMRWPFQYNIGLKTNDKYVSLINYLPKNKIESTNVSQTLGYNIGGNFQSAPSLGGNGSF NYSKSISYTQQNYVSEVEQQNSKSVLWGVKANSFATESGQKSAFDSDLFVGYKPHSKDPRDYFVPDSELPPLVQSGFNPS FIATVSHEKGSSDTSEFEITYGRNMDVTHAIKRSTHYGNSYLDGHRVHNAFKNRNYTVKYEVNWKTHEIKVKGQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lukS | NP_646196.1 | Panton-Valentine leukocidin chain S precursor | Virulence | ¥ÕSa2 | Protein | 2e-112 | 77 |
| lukS-PV | YP_494079.1 | Panton-Valentine leukocidin, LukS-PV | Virulence | ¥ÕSa2 | Protein | 2e-112 | 77 |
| lukE | YP_494460.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 1e-87 | 67 |
| lukE | YP_186708.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 1e-87 | 67 |
| lukE | NP_646585.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 1e-87 | 67 |
| lukE | NP_372344.1 | leukotoxin S-subunit | Virulence | vSa¥â | Protein | 1e-87 | 67 |
| lukE | NP_374927.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 1e-87 | 67 |
| lukE | YP_001332753.1 | leukocidin LukE precursor | Virulence | vSa¥â | Protein | 1e-87 | 67 |
| SAKOR_01768 | YP_008491956.1 | Leukocidin S subunit lukE | Virulence | vSa¥â | Protein | 1e-87 | 67 |
| SAOV_1909 | YP_005737354.1 | leukocidin chain lukM precursor | Virulence | ¥ÕSa3 | Protein | 1e-85 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hlgC | YP_005746849.1 | gamma hemolysin | VFG1274 | Protein | 1e-132 | 99 |
| hlgC | YP_005746849.1 | gamma hemolysin | VFG1277 | Protein | 8e-113 | 77 |
| hlgC | YP_005746849.1 | gamma hemolysin | VFG1273 | Protein | 1e-88 | 69 |
