Gene Information

Name : HMPREF0772_10486 (HMPREF0772_10486)
Accession : YP_005746568.1
Strain : Staphylococcus aureus TCH60
Genome accession: NC_017342
Putative virulence/resistance : Resistance
Product : ABC superfamily ATP binding cassette transporter, ABC protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 534642 - 535400 bp
Length : 759 bp
Strand : -
Note : COG: COG1136

DNA sequence : 
ATGACGATATTATCAGTGCAACATGTTTCAAAAACATACGGTAAAAAGCACACATTTCAAGCACTTAAAGATATTAACTT
TGACATACAAAAAGGCGAATTCGTTGCGATTATGGGGCCTTCTGGATCAGGTAAGACAACCTTATTAAATGTACTAAGTT
CAATTGACCAAATTTCTAGCGGTAGCGTGATTGCTAACGGACAAGAGCTTAATAAACTTAATCAAAAAGCACTTGCCAAA
TTCCGTAAAGAATCATTAGGTTTCATCTTCCAAGATTACAGTATTCTGCCGACATTAACTGTTAAAGAAAACATTATGTT
ACCTTTATCTGTTCAAAAAATGTCGAAAGCAACAATGGAAGAAAATTATAAAGCAATCACAACAGCATTAGGTATTTATG
ACCTAGGAAATAAATACCCTAGCGAATTATCTGGTGGTCAACAACAAAGAACTGCAGCAGCGAGAGCATTTGTTCACAAA
CCACAAATCATATTTGCAGATGAGCCAACAGGCGCACTCGACTCGAAAAGTGCAAATGATTTATTACAACGTTTGGAAGA
AATGAATAAATCGTTTGATACCACAATTGTCATGGTTACACATGATCCGGTTGCAGCAAGTTTTGCAGAACGTGTCATCA
TGCTAAAAGATGGCCAAATTCATACACAACTTTATCAGGAAGGACGTTCTAAACAGGCCTTTTATGAAGACATTGTACAT
CTTCAATCAGTATTAGGTGGTGTCTCAAATGACATTTAA

Protein sequence : 
MTILSVQHVSKTYGKKHTFQALKDINFDIQKGEFVAIMGPSGSGKTTLLNVLSSIDQISSGSVIANGQELNKLNQKALAK
FRKESLGFIFQDYSILPTLTVKENIMLPLSVQKMSKATMEENYKAITTALGIYDLGNKYPSELSGGQQQRTAAARAFVHK
PQIIFADEPTGALDSKSANDLLQRLEEMNKSFDTTIVMVTHDPVAASFAERVIMLKDGQIHTQLYQEGRSKQAFYEDIVH
LQSVLGGVSNDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-32 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0772_10486 YP_005746568.1 ABC superfamily ATP binding cassette transporter, ABC protein CP001581.1.gene798.p Protein 1e-35 43
HMPREF0772_10486 YP_005746568.1 ABC superfamily ATP binding cassette transporter, ABC protein CP001581.1.gene598.p Protein 2e-37 43
HMPREF0772_10486 YP_005746568.1 ABC superfamily ATP binding cassette transporter, ABC protein NC_012469.1.7686878. Protein 4e-36 43