Gene Information

Name : cap5A (HMPREF0772_10349)
Accession : YP_005746431.1
Strain : Staphylococcus aureus TCH60
Genome accession: NC_017342
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein Cap5A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 382683 - 383351 bp
Length : 669 bp
Strand : -
Note : COG: COG3944

DNA sequence : 
ATGGAAAGTACATTAGAATTAACAAAAATTAAAGAAGTATTACAAAAAAACTTGAAGATTTTAATTATTTTACCGCTATT
ATTTTTAATTATTAGCGCTATTGTTACATTTTTCGTCTTATCACCTAAATATCAAGCTAATACTCAAATTTTAGTGAATC
AAACTAAGGGTGACAATCCTCAGTTTATGGCGCAAGAGGTTCAAAGTAATATTCAACTTGTAAATACGTATAAAGAAATT
GTTAAAAGTCCTAGAATTTTAGATGAGGTGTCAAAGGACTTAAATGATAAGTATTCACCATCTAAATTATCGAGTATGTT
GACAATTACAAACCAAGAAAATACACAACTTATCAACATCCAAGTTAAAAGTGGTCATAAACAAGATTCGGAAAAAATTG
CGAATAGCTTCGCTAAAGTTACAAGTAAACAAATTCCGAAGATTATGAGTGTGGATAACGTATCAATTTTATCTAAAGCA
GACGGTACAGCAGTTAAAGTCGCACCAAAAACTGTAGTGAATCTAATCGGTGCACTCTTTTTAGGATTAGTTGTCGCGCT
TATATATATCTTCTTCAAAGTAATTTTTGATAAGCGAATTAAAGATGAAGAAGATGTAGAGAAAGAATTAGGATTGCCTG
TATTGGGTTCAATTCAAAAATTTAATTAA

Protein sequence : 
MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEI
VKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKA
DGTAVKVAPKTVVNLIGALFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1A AAA64640.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-54 65
SSP0060 YP_300150.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 2e-48 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cap5A YP_005746431.1 capsular polysaccharide biosynthesis protein Cap5A VFG1297 Protein 6e-63 100