Gene Information

Name : sitC (HMPREF0772_12556)
Accession : YP_005748638.1
Strain : Staphylococcus aureus TCH60
Genome accession: NC_017342
Putative virulence/resistance : Virulence
Product : iron ABC superfamily ATP binding cassette transporter, binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2669518 - 2670447 bp
Length : 930 bp
Strand : +
Note : COG: COG0803

DNA sequence :
ATGAAAAAATTAGTACCTTTATTATTAGCCTTATTACTTTTAGTTGCTGCATGTGGTACTGGTGGTAAACAAAGCAGTGA
TAAGTCAAATGGCAAACTAAAAGTAGTAACGACGAATTCAATTTTATATGATATGGCTAAAAATGTTGGTGGAGACAACG
TCGATATTCATAGTATTGTACCTGTTGGTCAAGATCCTCATGAATATGAAGTTAAACCTAAAGATATTAAAAAGTTAACT
GACGCTGACGTTATTTTATACAACGGATTAAATTTAGAGACTGGTAACGGTTGGTTTGAAAAAGCCTTAGAACAGGCTGG
TAAATCATTAAAAGATAAAAAAGTTATCGCAGTATCAAAAGATGTTAAACCTATCTATTTAAACGGTGAAGAAGGCAACA
AAGATAAACAAGATCCACACGCATGGTTAAGTTTAGATAACGGTATTAAATACGTAAAAACAATTCAACAAACATTTATC
GATAACGACAAAAAACATAAAGCAGATTATGAAAAGCAAGGTAACAAATACATTGCTCAATTGGAAAAATTAAATAACGA
CAGTAAAGACAAATTTAATGACATTCCAAAAGAACAACGTGCCATGATTACAAGTGAAGGTGCCTTCAAGTACTTCTCAA
AACAATACGGTATTACACCAGGTTATATTTGGGAAATTAACACTGAAAAACAAGGTACACCAGAACAAATGAGACAAGCT
ATTGAGTTTGTTAAAAAGCACAAATTAAAACACTTATTAGTAGAAACAAGTGTTGATAAGAAAGCAATGGAAAGTTTATC
TGAAGAAACGAAGAAAGATATCTTTGGTGAAGTGTACACAGATTCAATCGGTAAAGAAGGCACTAAAGGTGACTCTTACT
ACAAAATGATGAAATCAAATATTGAAACTGTACACGGAAGCATGAAATAA

Protein sequence :
MKKLVPLLLALLLLVAACGTGGKQSSDKSNGKLKVVTTNSILYDMAKNVGGDNVDIHSIVPVGQDPHEYEVKPKDIKKLT
DADVILYNGLNLETGNGWFEKALEQAGKSLKDKKVIAVSKDVKPIYLNGEEGNKDKQDPHAWLSLDNGIKYVKTIQQTFI
DNDKKHKADYEKQGNKYIAQLEKLNNDSKDKFNDIPKEQRAMITSEGAFKYFSKQYGITPGYIWEINTEKQGTPEQMRQA
IEFVKKHKLKHLLVETSVDKKAMESLSEETKKDIFGEVYTDSIGKEGTKGDSYYKMMKSNIETVHGSMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 4e-63 47
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 6e-63 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitC YP_005748638.1 iron ABC superfamily ATP binding cassette transporter, binding protein VFG2165 Protein 3e-70 51
sitC YP_005748638.1 iron ABC superfamily ATP binding cassette transporter, binding protein VFG1359 Protein 2e-68 50
sitC YP_005748638.1 iron ABC superfamily ATP binding cassette transporter, binding protein VFG2157 Protein 2e-70 50