Gene Information

Name : nrdE (HMPREF0772_12453)
Accession : YP_005748535.1
Strain : Staphylococcus aureus TCH60
Genome accession: NC_017342
Putative virulence/resistance : Unknown
Product : ribonucleotide-diphosphate reductase subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : 1.17.4.1
Position : 2564250 - 2566355 bp
Length : 2106 bp
Strand : -
Note : COG: COG0209

DNA sequence :
ATGAAAACCATGGAAGAGAAAAAGTACAATCATATTGAATTAAATAATGAGGTCACTAAACGAAGAGAAGATGGATTCTT
TAGTTTAGAAAAAGACCAAGAAGCTTTAGTAGCTTATTTAGAAGAAGTAAAAGATAAAACAATCTTCTTCGACACTGAAA
TCGAGCGTTTACGTTATTTAGTAGACAACGATTTTTATTTCAATGTGTTTGATATTTATAGTGAAGCGGATCTAATTGAA
ATCACTGATTATGCAAAATCAATCCCGTTTAATTTTGCAAGTTATATGTCAGCTAGTAAGTTTTTCAAAGATTACGCTTT
GAAAACAAATGATAAAAGTCAATATTTAGAAGACTATAATCAACACGTTGCAATTGTTGCTTTATACCTAGCAAATGGTA
ATAAAGCACAAGCTAAACAATTTATTTCTGCTATGGTTGAACAAAGATATCAACCAGCGACACCAACATTTTTAAACGCC
GGCCGTGCGCGTCGTGGTGAGCTAGTGTCATGTTTCTTATTAGAAGTGGATGACAGCTTAAATTCAATTAACTTTATTGA
TTCAACTGCAAAACAATTAAGTAAAATTGGTGGCGGCGTAGCAATTAACTTATCTAAATTGCGTGCACGTGGTGAAGCGA
TTAAAGGAATTAAAGGCGTAGCGAAAGGTGTTTTACCTATTGCTAAGTCACTTGAAGGTGGCTTTAGCTATGCAGATCAA
CTAGGTCAACGCCCTGGTGCTGGTGCTGTGTACTTAAATATCTTCCATTATGATGTAGAAGAATTTTTAGATACTAAAAA
AGTAAATGCGGATGAAGATTTACGTTTATCTACAATATCAACTGGTTTAATTGTTCCATCTAAATTCTTCGATTTAGCTA
AAGAAGGTAAAGACTTTTATATGTTTGCACCTCATACAGTTAAAGAAGAATACGGTGTTACATTAGACGATATTGATTTA
GAAAAATATTATGATGATATGGTTGCAAATCCAAATGTTGAGAAAAAGAAAAAGAATGCACGTGAAATGTTGAATTTAAT
TGCGCAAACACAATTACAATCAGGCTATCCATATTTAATGTTTAAAGATAATGCTAATAGAGTTCATCCGAATTCAAATA
TTGGACAAATTAAGATGAGTAACTTATGTACTGAAATTTTCCAATTACAAGAAACTTCAATTATTAACGACTATGGTATT
GAAGACGAAATTAAACGTGATATTTCTTGTAACTTAGGTTCATTAAACATTGTAAATGTAATGGAAAGCGGAAAATTCAG
AGATTCAGTTCACTCTGGTATGGACGCATTAACTGTTGTAAGTGATGTAGCAAATATTCAAAATGCTCCAGGAGTTAGAA
AAGCTAATAGTGAATTACATTCAGTTGGTCTTGGTGTGATGAATTTACATGGTTACTTAGCAAAAAATAAAATTGGTTAT
GAGTCAGAAGAAGCAAAAGATTTTGCAAATATCTTCTTTATGATGATGAATTTCTACTCAATCGAACGTTCAATGGAAAT
CGCTAAAGAACGTGGTATCAAATATCAAGACTTTGAAAAGTCTGATTATGCTAATGGCAAATATTTCGAGTTCTATACAA
CTCAAGAATTTGAACCTCAATTCGAAAAAGTACGTGAATTATTTGACGGTATGGCTATTCCTACTTCTGAGGATTGGAAG
AAACTACAACAAGATGTTGAACAATATGGTTTATATCATGCATATAGATTAGCTATTGCTCCAACACAAAGTATTTCTTA
TGTTCAAAATGCTACAAGTTCTGTAATGCCAATAGTAGATCAAATTGAACGTCGTACTTATGGTAATGCGGAAACATTTT
ACCCTATGCCATTCTTATCGCCTCAAACAATGTGGTACTACAAATCTGCATTCAATACTGATCAGATGAAATTAATCGAT
TTAATTGCGACAATTCAAACGCATATTGACCAAGGTATCTCAACGATACTTTATGTTAATTCTGAAATTTCTACACGTGA
GTTAGCAAGATTATATGTATATGCGCACTATAAAGGATTAAAATCACTTTACTATACTAGAAATAAATTATTAAGTGTAG
AAGAATGTACAAGTTGTTCTATCTAA

Protein sequence :
MKTMEEKKYNHIELNNEVTKRREDGFFSLEKDQEALVAYLEEVKDKTIFFDTEIERLRYLVDNDFYFNVFDIYSEADLIE
ITDYAKSIPFNFASYMSASKFFKDYALKTNDKSQYLEDYNQHVAIVALYLANGNKAQAKQFISAMVEQRYQPATPTFLNA
GRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIKGVAKGVLPIAKSLEGGFSYADQ
LGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRLSTISTGLIVPSKFFDLAKEGKDFYMFAPHTVKEEYGVTLDDIDL
EKYYDDMVANPNVEKKKKNAREMLNLIAQTQLQSGYPYLMFKDNANRVHPNSNIGQIKMSNLCTEIFQLQETSIINDYGI
EDEIKRDISCNLGSLNIVNVMESGKFRDSVHSGMDALTVVSDVANIQNAPGVRKANSELHSVGLGVMNLHGYLAKNKIGY
ESEEAKDFANIFFMMMNFYSIERSMEIAKERGIKYQDFEKSDYANGKYFEFYTTQEFEPQFEKVRELFDGMAIPTSEDWK
KLQQDVEQYGLYHAYRLAIAPTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPQTMWYYKSAFNTDQMKLID
LIATIQTHIDQGISTILYVNSEISTRELARLYVYAHYKGLKSLYYTRNKLLSVEECTSCSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 2e-134 43