Gene Information

Name : HMPREF0772_12344 (HMPREF0772_12344)
Accession : YP_005748426.1
Strain : Staphylococcus aureus TCH60
Genome accession: NC_017342
Putative virulence/resistance : Virulence
Product : phage terminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2464885 - 2465454 bp
Length : 570 bp
Strand : -
Note : COG: COG3728

DNA sequence :
ATGAGTGAGTTAACGGCAAAACAAGCGCGTTTTGTGAATGAGTATATTAGAACACTTAATGTTACACAAAGTGCTATAAA
AGCAGGTTATAGCGCAAATAGTGCACATGTGACAGGGTGTAGGTTATTGAAGAAGCCACACATCAAGCAATATATACAAG
AACAAAAAGATAAGATTATAGATGAGAATGTATTAACCGCAAAAGAGTTACTACATGTGCTTACGAATGCGGCAGTCGGT
GATGAAACAGAAACGAAAGAAGTTGTAGTCAAGCGAGGGGAATATAAAGAGAATCCACAAAGTGGCAAAGTACAGCTAGT
CTATAACGAACATGTTGAACTGGTAGAGGTGCCAATTAAGCCAAGTGATCGTTTAAAAGCTCGTGATATGTTGGGGAAAT
ACTATAAGTTATTTACAGATAAGCATGATATTAACGGCAATGTGCCTATATTCATTAACATTGGTGAATGGGACGGAGAC
GATGAGGAATTAGATAAGGCAGTGAAAAATGTATCTAACGCTAATCCTAATCATACTGTGATTTTGGATGATATACCATT
AGAGGATTGA

Protein sequence :
MSELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQYIQEQKDKIIDENVLTAKELLHVLTNAAVG
DETETKEVVVKRGEYKENPQSGKVQLVYNEHVELVEVPIKPSDRLKARDMLGKYYKLFTDKHDINGNVPIFINIGEWDGD
DEELDKAVKNVSNANPNHTVILDDIPLED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SACOL0906 YP_185777.1 phage terminase Not tested vSa1 Protein 6e-83 98
SAV0800 NP_371324.1 bacteriophage terminase small subunit Not tested vSa3 Protein 3e-83 98
ter ABJ97289.1 terminase Not tested SaPI2 Protein 5e-83 97
unnamed AAG29602.1 Orf5 Not tested SaPIbov Protein 4e-83 97
SAB0359 YP_415861.1 pathogenicity island protein Not tested SaPIbov Protein 5e-83 97
SAR0382 YP_039839.1 terminase small subunit Not tested SaPI4 Protein 3e-83 97
unnamed AAL04127.1 unknown Not tested SaPI3 Protein 3e-80 97
ter AAL67611.1 terminase Not tested SaPI1 Protein 6e-83 97
SAV2012 NP_372536.1 bacteriophage terminase small subunit Not tested vSa4 Protein 9e-83 97
unnamed AET14346.1 terminase small subunit Virulence SaPI68111 Protein 6e-83 97
SA1820 NP_375121.1 hypothetical protein Not tested vSa4 Protein 9e-83 97
SAAV_0805 YP_003281728.1 pathogenicity island protein ORF5; phage terminase family protein Not tested SaPIAv Protein 3e-82 96
SACOL2014 YP_186834.1 phage terminase Not tested vSa4 Protein 2e-81 96
MW1949 NP_646766.1 hypothetical protein Not tested vSa4 Protein 3e-81 95
unnamed AAP55238.1 bacteriophage terminase small subunit Not tested SaPIbov2 Protein 1e-67 72