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Name : HMPREF0772_12276 (HMPREF0772_12276) Accession : YP_005748358.1 Strain : Staphylococcus aureus TCH60 Genome accession: NC_017342 Putative virulence/resistance : Unknown Product : IS1272 transposase Function : - COG functional category : - COG ID : - EC number : - Position : 2395773 - 2397386 bp Length : 1614 bp Strand : - Note : COG: COG3666 DNA sequence : ATGTATAAAAATTATAACATGACCCAACTTACACTACCAATAGAAACTTCTGTTAGAATTCCTCAAAATGATATTTCACG ATATGTTAATGAAATTGTTGAAACGATACCTGATAGCGAATTCGATGAATTCAGACATCATCGTGGCGCAACATCCTATC ATCCAAAAATGATGTTAAAAATTATCTTATATGCATACACTCAATCTGTATTTTCTGGTCGTAGAATAGAGAAATTACTT CATGACAGTATTCGAATGATGTGGTTAGCTCAAAATCAAACACCTTCTTATAAAACTATTAATCGTTTTAGAGTAAATCC TAATACTGATGCATTAATTGAATCTTTATTTATTCAGTTTCATAGTCAATGTTTAAAGCAAAATCTTATTGATGATAATT CAATTTTTATTGATGGTGCAAAAGTAGAAGCTAATGCCAATAGGTATACATTTGTGTGGAAGAAAAGTATTCAAAATCAC GAATCGAAATTGAACGAAAATTCAAAAGCATTATATCGTGACTTAGTTGAAGAAAAAATAATACCAGAGATAAAAGAAGA TGGAGATAGCGATTTAACAATAGAAGAAATAGATTTAATTGGTAGTCATTTAGATAAAGAAATCGAAGATTTAAATCATT CTATTCAGAACGAAGATTGTACTCAAATTAGAAAACAGACCCGTAAAAAAAGAACTGAGATTAAGAAGTTCAAAAAGAAA TTTGATGATTATTCCGAAAGAAAAAGTAAATATGAAGAACAAAAATCGATTCTTAAAGATAGAAATAGCTTTTCTAAAAC TGATCATGATGCAACTTTTATGAGAATGAAGGAAGACCATATGAAAAATGGCCAACTTAAGCCAGGATACAATTTACAAA TAGCGACAAATTCTCAATTTGTTTTATCCTATGACCTATTTCAAAACCCGACAGATACTAGAACTTTAATTCCATTTTTA ACAATGATTCAAAATACCTTCGGTTATTTACCGGAGTATATTGTAGCTGATGCAGGTTATGGTAGTGAGCAAAACTATAT GGCTATTATAGATGATTTTAATAAAACGCCACTTATTACGTATGGTATGTTTATTAAAGATAAAACGAGAAAGTTTAAAA GTGCCATTTTTAACACTCAAAACTGGAAATATGACGAACTTAATGATGAATTTATATGTCCTAATAACAAAAGAATAGGT TTTAAAAGATATGCATACCTTAATGATAGATATGGTTTTAAACGTGACTTCAAACTATATGAATGCGATGACTATTCAGC ATGTTCTTTGAGGCAACAATGCATGAAGCCAAATTCGAAATCCAATAAGAAAAGCATGAAGAATTATAATTGGGAATACT TTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAATCTATAGTCAAAGAAAAATTGATGTAGAGCCT GTTTTTGGATTTATGAAGGCTATTTTGGGTTTCACTCGAATGTCAGTTCGAGGAATAAATAAAGTTAAACGAGAGCTAGG TTTTGTATTAATGGCACTTAATATAAGGAAAATAGTAGCTCGACGAGCTGTATATTATCAAATACATTTAAAAAAGCTGA TTTCTATCAAATAA Protein sequence : MYKNYNMTQLTLPIETSVRIPQNDISRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIILYAYTQSVFSGRRIEKLL HDSIRMMWLAQNQTPSYKTINRFRVNPNTDALIESLFIQFHSQCLKQNLIDDNSIFIDGAKVEANANRYTFVWKKSIQNH ESKLNENSKALYRDLVEEKIIPEIKEDGDSDLTIEEIDLIGSHLDKEIEDLNHSIQNEDCTQIRKQTRKKRTEIKKFKKK FDDYSERKSKYEEQKSILKDRNSFSKTDHDATFMRMKEDHMKNGQLKPGYNLQIATNSQFVLSYDLFQNPTDTRTLIPFL TMIQNTFGYLPEYIVADAGYGSEQNYMAIIDDFNKTPLITYGMFIKDKTRKFKSAIFNTQNWKYDELNDEFICPNNKRIG FKRYAYLNDRYGFKRDFKLYECDDYSACSLRQQCMKPNSKSNKKSMKNYNWEYFKAQINQKLSEPETKKIYSQRKIDVEP VFGFMKAILGFTRMSVRGINKVKRELGFVLMALNIRKIVARRAVYYQIHLKKLISIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | Protein | 0.0 | 83 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 6e-177 | 83 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 8e-177 | 83 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 8e-177 | 83 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 8e-177 | 83 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 2e-174 | 83 |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 3e-167 | 82 |
| unnamed | BAC67565.1 | hypothetical protein | Not tested | Type-IVc SCCmec | Protein | 2e-143 | 81 |
