Gene Information

Name : hly (HMPREF0772_12071)
Accession : YP_005748153.1
Strain : Staphylococcus aureus TCH60
Genome accession: NC_017342
Putative virulence/resistance : Virulence
Product : alpha-hemolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2189148 - 2190116 bp
Length : 969 bp
Strand : +
Note : -

DNA sequence :
ATGATGAAAATGAAAACACGTATAGTCAGCTCAGTAACAACAACACTATTGCTAGGTTCTATATTAATGAATCCTGTCGC
TAATGCCGCAGATTCTGATATTAATATTAAAACCGGTACTACAGATATAGGAAGCAATACTACAGTAAAAACAGGTGATT
TAGTCACTTATGATAAAGAAAATGGCATGCACAAAAAAGTATTTTATAGTTTTATCGATGATAAAAATCACAATAAAAAA
ATATTAGTCATCAGAACGAAAGGTACCATTGCTGGTCAGTATAGAGTTTATAGCGAAGAAGGCGCTAATAAAAGCGGTTT
AGCCTGGCCTTCAGCATTTAAGGTACAGTTGCAACTACCTGATAATGAAGTAGCACAAATTTCTGATTACTACCCTAGAA
ATTCAATTGATACTAAAGAATATATGAGTACATTAACTTATGGATTCAACGGTAACGTGACTGGTGATGATTCTGGAAAA
ATTGGCGGTTTGATTGGTGCAAATGTTTCAATTGGTCATACACTCAAATATGTTCAACCAGATTTCAAAACAATTTTAGA
AAGTCCAACTGATAAAAAAGTAGGTTGGAAAGTTATATTTAACAATATGGTGAATCAAAATTGGGGACCATATGACAGAG
ATTCTTGGAACCCAGTATATGGCAATCAACTTTTCATGAAAACAAGAAACGGTTCAATGAAAGCAGCAGAGAACTTCCTT
GACCCTAACAAAGCAAGTTCTTTATTATCTTCAGGATTCTCACCAGACTTTGCTACAGTTATTACTATGGATAGGAAAGC
AACCAAACAACAAACAAATATAGATGTAATATACGAACGAGTTCGTGATGACTATCAACTACATTGGACTTCAACAAATT
GGAAAGGTACCAATACTAAAGATAAATGGACAGATCGTTCTTCAGAAAGATATAAAATCGATTGGGAAAAAGAAGAAATG
ACAAATTAA

Protein sequence :
MMKMKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKK
ILVIRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDSGK
IGGLIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAAENFL
DPNKASSLLSSGFSPDFATVITMDRKATKQQTNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWTDRSSERYKIDWEKEEM
TN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_1058 YP_493756.1 alpha-hemolysin Not tested vSa¥ã Protein 5e-144 99
MW1044 NP_645861.1 alpha-hemolysin Virulence vSa¥ã Protein 2e-144 99
SAV1163 NP_371687.1 alpha-hemolysin Virulence vSa¥ã Protein 2e-144 99
SA1007 NP_374279.1 alpha-hemolysin Virulence vSa¥ã Protein 2e-144 99
SAKOR_01084 YP_008491272.1 Leukocidin F subunit Virulence vSa¥ã Protein 2e-146 99
hlY YP_186036.1 alpha-hemolysin precursor Virulence vSa¥ã Protein 5e-144 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hly YP_005748153.1 alpha-hemolysin VFG1293 Protein 8e-145 99