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Name : HMPREF0772_12069 (HMPREF0772_12069) Accession : YP_005748151.1 Strain : Staphylococcus aureus TCH60 Genome accession: NC_017342 Putative virulence/resistance : Unknown Product : IS1272 transposase Function : - COG functional category : - COG ID : - EC number : - Position : 2186210 - 2187856 bp Length : 1647 bp Strand : - Note : COG: COG3666 DNA sequence : ATGTATAAAAATTATAACATGACCCAACTTACACTACCAATAGAAACTTCTGTTAGAATTCCTCAAAATGATATTTCACG ATATGTTAATGAAATTGTTGAAACGATACCTGATAGCGAATTCGATGAATTCAGACATCATCGTGGCGCAACATCCTATC ATCCAAAAATGATGTTAAAAATTATCTTATATGCATACACTCAATCTGTATTTTCTGGTCGTAGAATAGAGAAATTACTT CATGACAGTATTCGATTGATGTGGTTAGCTCAAGATCAAACACCTTCTTATAAAACTATTAATCGTTTTAGAGTGAATCC TAATACTGATGCGCTAATTGAATCTTTATTTATTCAGTTCCATAGTCAATGTTTAAAGCAAAATCTTATTGATGATAAAT CAATTTTTATTGATGGTACAAAAGTAGAAGCTAGTGCCAATAGATATACATTTGTGTGGAAGAAAAGTATTCAAAATTAC GAATCGAAATTGAACGAAAATTCAAAAGCATTATATCGTGACTTAGTCGAAGAAATAATAATACCAGAGATAAAAGAAGA TGGAGATAGCGATTTAACAATAGAAGAAATAGATTTAATTGGTAGTCATTTAGATAAAGAAATCGAAGATTTAAATCATT CTATTCAGAACGAAGATTGTACTCAAATTAGAAAACAGACCCGTAAAAAAAGAACTGAGATTAAGAAGTTCAAAAAGAAA TTTGATGATTATTCCGAAAGAAAAAGTAAATATGAAGAACAAAAATCGATTCTTAAAGATAGAAATAGCTTTTCTAAAAC TGATCATGATGCAACTTTTATGAGAATGAAGGAAGACCATATGAAAAATGGCCAACTTAAGCCAAGATACAATTTACAAA TAGCGACAAATTCTCAATTTGTTTTATCCTATGACCTATTTCAAAACCCGACAGATACTAGAACTTTAATTCCATTTTTA ACAATGATTCAAAATACCTTCGGTTATTTACCGGAGTATATTGTAGCTGATGCAGGTTATGGTAGTGAGCAAAACTATAT GGCTATTATAGATGATTTTAATAAAACGCCACTTATTACGTATGGTATGTTTATTAAAGATAAAACGAGAAAGTTTAAAA GTGACATTTTTAAGACTCAAAACTGGAAATATGACGAACTTAATGATGAATTTATATGTCCTAATAACAAAAGAATAGGT TTAAAAAGATATGCATACCGTAATGATAGATATGGTTTTAAACGTGACTTCAAACTATATGAATGCGATGACTGTTCAGC ATGTTCTTTGAGGCAACAATGCATGAAGCCAAATTCGAAATCCAATAAGAAAATCATGAAGAATTATAATTGGGAATACT TTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAATCTATAGTCAAAGAAAAATTGATGTAGAGCCT GTTTTTGGATTTATGAAGGCTATTTTGGGTTTCACTCGAATGTCAGTTCGAGGAATAAATAAAGTTAAACGAGAGCTAGG TTTTGTATTAATGGCACTTAATATAAGGAAAATAGTAGCTCGACGAGCTGTATATTATCAAATACATTTAAAAAAAGCTG ATTTCTATCAAATAATTAATAGAAATCAGCTTTTTTACATTGCCTAA Protein sequence : MYKNYNMTQLTLPIETSVRIPQNDISRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIILYAYTQSVFSGRRIEKLL HDSIRLMWLAQDQTPSYKTINRFRVNPNTDALIESLFIQFHSQCLKQNLIDDKSIFIDGTKVEASANRYTFVWKKSIQNY ESKLNENSKALYRDLVEEIIIPEIKEDGDSDLTIEEIDLIGSHLDKEIEDLNHSIQNEDCTQIRKQTRKKRTEIKKFKKK FDDYSERKSKYEEQKSILKDRNSFSKTDHDATFMRMKEDHMKNGQLKPRYNLQIATNSQFVLSYDLFQNPTDTRTLIPFL TMIQNTFGYLPEYIVADAGYGSEQNYMAIIDDFNKTPLITYGMFIKDKTRKFKSDIFKTQNWKYDELNDEFICPNNKRIG LKRYAYRNDRYGFKRDFKLYECDDCSACSLRQQCMKPNSKSNKKIMKNYNWEYFKAQINQKLSEPETKKIYSQRKIDVEP VFGFMKAILGFTRMSVRGINKVKRELGFVLMALNIRKIVARRAVYYQIHLKKADFYQIINRNQLFYIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 1e-168 | 81 |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | Protein | 0.0 | 80 |
| unnamed | BAC67565.1 | hypothetical protein | Not tested | Type-IVc SCCmec | Protein | 9e-145 | 80 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 0.0 | 80 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 1e-180 | 80 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 0.0 | 80 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 0.0 | 80 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 0.0 | 80 |
