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Name : lukD (HMPREF0772_11714) Accession : YP_005747796.1 Strain : Staphylococcus aureus TCH60 Genome accession: NC_017342 Putative virulence/resistance : Virulence Product : leukotoxin LukD Function : - COG functional category : - COG ID : - EC number : - Position : 1792459 - 1793436 bp Length : 978 bp Strand : + Note : - DNA sequence : ATGAAAAAAATAGTCAAATCATCAGTTGTTACATCAATTGCATTGCTTTTGCTATCCAATACAGTTGATGCAGCTCAACA TATCACACCTGTAAGTGAGAAAAAGGTTGATGATAAAATTACTTTGTACAAAACAACTGCAACATCAGATTCCGATAAGT TAAAAATTTCTCAGATTTTAACTTTTAATTTTATTAAAGATAAAAGTTATGATAAAGATACATTAATACTCAAAGCTGCT GGAAACATTTATTCTGGCTATACAAAGCCAAATCCAAAAGACACTATTAGTTCTCAATTTTATTGGGGTTCTAAGTACAA CATTTCAATTAATTCAGATTCTAATGACTCAGTAAACGTTGTAGATTATGCACCTAAAAATCAAAATGAAGAATTTCAAG TACAACAAACGGTAGGTTATTCTTATGGTGGAGATATTAATATCTCTAACGGCTTATCAGGTGGAGGTAATGGTTCAAAA TCTTTTTCAGAGACAATTAACTATAAACAAGAAAGCTATAGAACTAGCTTAGATAAAAGAACTAATTTCAAAAAAATTGG TTGGGATGTTGAAGCACATAAAATTATGAATAATGGTTGGGGACCATATGGCAGAGATAGTTATCATTCAACTTATGGTA ATGAAATGTTTTTAGGCTCAAGACAAAGCAACTTAAATGCTGGACAAAACTTCTTGGAATATCACAAAATGCCAGTGTTA TCCAGAGGTAACTTCAATCCAGAATTTATTGGTGTCCTATCTCGAAAACAAAACGCTGCAAAAAAATCAAAAATTACTGT TACTTATCAAAGAGAAATGGATAGATATACAAACTTTTGGAATCAACTTCACTGGATAGGTAATAATTATAAAGATGAAA ATAGAGCAACTCATACATCAATTTATGAAGTTGATTGGGAAAATCATACAGTTAAATTAATAGATACTCAATCTAAGGAA AAAAATCCTATGAGCTAA Protein sequence : MKKIVKSSVVTSIALLLLSNTVDAAQHITPVSEKKVDDKITLYKTTATSDSDKLKISQILTFNFIKDKSYDKDTLILKAA GNIYSGYTKPNPKDTISSQFYWGSKYNISINSDSNDSVNVVDYAPKNQNEEFQVQQTVGYSYGGDINISNGLSGGGNGSK SFSETINYKQESYRTSLDKRTNFKKIGWDVEAHKIMNNGWGPYGRDSYHSTYGNEMFLGSRQSNLNAGQNFLEYHKMPVL SRGNFNPEFIGVLSRKQNAAKKSKITVTYQREMDRYTNFWNQLHWIGNNYKDENRATHTSIYEVDWENHTVKLIDTQSKE KNPMS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lukF | NP_646195.1 | Panton-Valentine leukocidin chain F precursor | Virulence | ¥ÕSa2 | Protein | 4e-127 | 100 |
| lukF-PV | YP_494078.1 | Panton-Valentine leukocidin, LukF-PV | Virulence | ¥ÕSa2 | Protein | 4e-127 | 100 |
| SAKOR_01767 | YP_008491955.1 | Leukocidin F subunit lukD | Virulence | vSa¥â | Protein | 6e-109 | 84 |
| lukD | NP_372343.2 | leukotoxin F-subunit | Virulence | vSa¥â | Protein | 6e-109 | 84 |
| lukD | NP_374926.1 | leukotoxin, LukD | Virulence | vSa¥â | Protein | 6e-109 | 84 |
| lukD | NP_646584.1 | leukotoxin | Virulence | vSa¥â | Protein | 7e-109 | 83 |
| lukD | YP_001332752.1 | leukocidin LukD precursor | Virulence | vSa¥â | Protein | 7e-109 | 83 |
| lukD | YP_494459.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 7e-109 | 83 |
| lukD | YP_186707.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 7e-109 | 83 |
| SAOV_1908 | YP_005737353.1 | Panton-Valentine leukocidin LukF-PV chain precursor | Virulence | ¥ÕSa3 | Protein | 3e-107 | 81 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lukD | YP_005747796.1 | leukotoxin LukD | VFG1276 | Protein | 2e-127 | 100 |
| lukD | YP_005747796.1 | leukotoxin LukD | VFG1275 | Protein | 1e-93 | 73 |
