Gene Information

Name : arsB (HMPREF0772_11381)
Accession : YP_005747463.1
Strain : Staphylococcus aureus TCH60
Genome accession: NC_017342
Putative virulence/resistance : Resistance
Product : arsenic efflux pump protein ArsB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1450878 - 1452176 bp
Length : 1299 bp
Strand : -
Note : COG: COG1055

DNA sequence :
ATGCTAATGATGACAACTTTAGCGACATTCATTTTTCTAGTAACTTTATTATTTGTATTATGGCAACCTAAAGGCCTAGA
TATTGGATTTACTGCATTAGCAGGTGCCTTTATTGCTGTTATTACTGGTGTTGTAAGTTTTTCCGATGTTTTCGAAGTAA
CAGGTATAGTCTGGAATGCCACTTTAACTTTTGTATCAGTCATTCTTATTTCATTAATATTAGATAAAGTTGGATTATTC
GAATGGTCAGCTATTCACATGCTTCATGCTTCAAAAGGTAGTGGCCTAAAAATGTTCGTTTATATCATATTATTGGGTGC
CGTGGTTGCTGCATTTTTCGCAAATGATGGCGCAGCTTTAATCTTAACGCCCATTGTATTAGCAATGGTAAAAAATATAG
GTTTTAGTAAGCGGGCCATATTTCCATTTATTATTGCAAGTGGTTTTATTGCTGATACAACGTCTTTACCTTTAATCGTG
AGCAATTTGGTCAATATCATTTCTGCAGATTACTTTAACATTAGTTTCTCTCAATATCTTAGTAGAATGATTATCCCTAA
TTTATTCTCGTTATTAGCTAGCCTTCTAGTTTTGTGGTTATATTTTAGAAAAGCGATTCCTAAATCATTTGATGCAAATC
ACATAAAAAAACCTATAGATGCCATTAATGATTTAAAGCTATTTAAAATTTCATGGATTGTTCTAGTTATATTACTTTTC
GGCTATCTAATCAGTGAATTTACTAAAATTCCGGTATCAATTTTCACCGGAATCATTGCTTTTATATTTCTAATATTGGC
TCGTAAATCAAATGCTGTAAATATTAAGCAAGTCATTAAGGGCGCACCTTGGAATATAGTATTATTTTCAATTGGTATGT
ATATCGTCGTATTCGGCTTAAGAAATGCTGGCATTACTTTAATATTAGCTAAAATATTAGAATATATTTCCAATTACGGT
CTATTTAGCACTATTTTGGGAATGGGCTTCATTTCAGCATTTTTATCATCAATAATGAATAATATGCCTACAGTTTTAAT
AGATGCGATTGCTATTGGTCAATCAAATGTCCATGGCATGTTAAAAGAAGGCCTAATTTATGCAAATGTTATCGGTTCTG
ATTTAGGTCCAAAAATTACACCGATAGGCTCTTTAGCTACATTACTGTGGTTACACGTCTTAACACAAAAAGATGTTAAG
ATTTCTTGGGGCACATACTTTAAAACTGGTATCATCATTACAATTCCAGTACTATTTTTCACACTTTTAGGATTATATCT
AACACTTATACTATTTTAA

Protein sequence :
MLMMTTLATFIFLVTLLFVLWQPKGLDIGFTALAGAFIAVITGVVSFSDVFEVTGIVWNATLTFVSVILISLILDKVGLF
EWSAIHMLHASKGSGLKMFVYIILLGAVVAAFFANDGAALILTPIVLAMVKNIGFSKRAIFPFIIASGFIADTTSLPLIV
SNLVNIISADYFNISFSQYLSRMIIPNLFSLLASLLVLWLYFRKAIPKSFDANHIKKPIDAINDLKLFKISWIVLVILLF
GYLISEFTKIPVSIFTGIIAFIFLILARKSNAVNIKQVIKGAPWNIVLFSIGMYIVVFGLRNAGITLILAKILEYISNYG
LFSTILGMGFISAFLSSIMNNMPTVLIDAIAIGQSNVHGMLKEGLIYANVIGSDLGPKITPIGSLATLLWLHVLTQKDVK
ISWGTYFKTGIIITIPVLFFTLLGLYLTLILF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-136 81
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 8e-137 81
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-143 81
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-101 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_005747463.1 arsenic efflux pump protein ArsB BAC0575 Protein 4e-144 81
arsB YP_005747463.1 arsenic efflux pump protein ArsB BAC0574 Protein 5e-139 81
arsB YP_005747463.1 arsenic efflux pump protein ArsB BAC0578 Protein 7e-103 56
arsB YP_005747463.1 arsenic efflux pump protein ArsB BAC0576 Protein 1e-101 56
arsB YP_005747463.1 arsenic efflux pump protein ArsB BAC0577 Protein 7e-101 55
arsB YP_005747463.1 arsenic efflux pump protein ArsB BAC0031 Protein 8e-98 55