|
Name : lysS (HMPREF0772_10001) Accession : YP_005746083.1 Strain : Staphylococcus aureus TCH60 Genome accession: NC_017342 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 6664 - 8211 bp Length : 1548 bp Strand : - Note : COG: COG1190 DNA sequence : ATGTTTGAGTGTACCAGTTGGAATACTAAAGGATTACAACAAGTTAAAGGAGAGAAAGTTATGTCAGAAGAAATGAATGA CCAAATGTTGGTTCGACGTCAAAAATTACAAGAATTATATGATCTTGGTATAGACCCGTTTGGTTCTAAATTTGACCGTT CAGGTTTATCTAGTGATTTGAAAGAAGAGTGGGACCAGTATTCTAAAGAAGAATTGGTAGAAAAAGAAGCGGATAGTCAT GTCGCTATAGCTGGACGATTAATGACTAAGCGTGGTAAAGGTAAAGCAGGATTTGCACACGTTCAGGACTTAGCTGGACA AATTCAAATATACGTTCGTAAAGATCAAGTTGGCGATGACGAATTTGATTTATGGAAAAATGCTGATTTAGGCGATATCG TTGGTGTTGAAGGTGTAATGTTCAAAACAAATACTGGCGAATTATCGGTTAAAGCGAAGAAATTCACGCTACTAACTAAA TCATTGCGACCATTACCGGATAAATTCCACGGTTTACAGGATATTGAACAGAGATATCGTCAAAGATATTTAGATTTAAT TACGAACGAAGATAGCACTCGTACATTTATTAATCGTAGTAAAATCATTCAAGAAATGCGTAATTATTTAAATAATAAAG GTTTCTTGGAAGTAGAAACACCTATGATGCACCAAATTGCTGGTGGAGCAGCTGCTAGACCATTTGTAACACATCATAAT GCATTAGATGCAACGTTATACATGCGTATTGCTATTGAGTTGCATTTAAAACGTTTAATTGTCGGTGGACTTGAAAAAGT ATATGAAATTGGTAGAGTATTCCGTAATGAAGGTGTATCAACTAGACATAACCCTGAATTCACAATGATTGAATTATATG AAGCATATGCAGATTATCATGACATTATGGATTTAACAGAATCTATGGTGAGACATATTGCCAATGAAGTATTAGGTTCT GCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGA AGCTACTGGTGTAGATTTTTATGAAGTTAAAAGTGATGAAGAAGCTAAAGCTTTAGCTAAGGAACATGGTATTGAAATTA AAGATACAATGAAATATGGTCATATTTTAAATGAATTCTTTGAGCAAAAAGTTGAAGAAACACTTATTCAGCCAACGTTT ATCTATGGTCATCCGACTGAAATTTCACCTTTAGCGAAGAAAAATCCTGAAGATCCTAGATTTACTGATCGTTTCGAATT GTTCATTGTAGGTAGAGAGCATGCAAATGCATTTACTGAATTAAATGATCCTATTGATCAAAAAGGTCGTTTTGAAGCGC AACTTGTTGAAAAAGCGCAAGGTAATGATGAAGCGCATGAAATGGATGAAGATTACATTGAAGCGTTAGAATATGGTATG CCTCCGACAGGTGGTCTTGGTATCGGTATTGACAGATTAGTTATGTTATTAACTGACTCTCCATCAATCAGAGACGTATT ATTATTCCCTTATATGAGACAAAAATAA Protein sequence : MFECTSWNTKGLQQVKGEKVMSEEMNDQMLVRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSH VAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKNADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTK SLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHHN ALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGS AKVQYNGETIDLESAWTRLHIVDAVKEATGVDFYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKVEETLIQPTF IYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGM PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-120 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005746083.1 | lysine--tRNA ligase | VFG1668 | Protein | 5e-120 | 50 |
