Gene Information

Name : sek (HMPREF0772_11318)
Accession : YP_005747400.1
Strain : Staphylococcus aureus TCH60
Genome accession: NC_017342
Putative virulence/resistance : Virulence
Product : staphylococcal enterotoxin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1399858 - 1400586 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAAATTAAATACAGTTTTATATTAGTTTTTATATTATTTTTTAACATTAAAGACCTTTCGTATGCGCAAGGAGA
TATTGGTGTAGGTAACTTAAGAAATTTCTATACAAAATATGATTATATAGATTTAAAAGGCGTCACAGATAAAAACTTAC
CTATTGCAAATCAACTTGAATTTTCAACCGGTACCAATGATTTGATCTCAGAATCTAATAATTGGGACGAAATAAGTAAA
TTTAAAGGAAAGAAAATGGATATTTTTGGCATTGATTATAATGGTCCTTGTAAAACTAAATACATGTATGGAGGGGCCAC
TTTATCAGGACAATACTTAAATTCTGCTAGAAAAATCCCTATAAATCTTTGGATTAATGGCAAGCATAAAACAATTTCTA
CTGACAAAATAGCAACTAATAAAAAACTAGTCACAGCTCAAGAAATTGATGTTAAATTAAGGAGATATCTTCAAGAAGAA
TACAATATATATGGTCATAATAACAATGGTAAAGGTAAAGAATATGGGTATAAATCTAAATTTTATTCAGGTTTTAATAA
GGGGAAAGTTTTATTTCATTTAAATGATGAAAAATCATTTTCATATGATTTGTTTTATACAGGAGATGGACTGCCTGTAA
GTTTTTTGAAAATTTATGAAGATAATAAAATAATAGAATCTGAAAAATTTCATCTTGATGTTGAAATATCATATGTAGAT
AGTAACTAA

Protein sequence :
MKKIKYSFILVFILFFNIKDLSYAQGDIGVGNLRNFYTKYDYIDLKGVTDKNLPIANQLEFSTGTNDLISESNNWDEISK
FKGKKMDIFGIDYNGPCKTKYMYGGATLSGQYLNSARKIPINLWINGKHKTISTDKIATNKKLVTAQEIDVKLRRYLQEE
YNIYGHNNNGKGKEYGYKSKFYSGFNKGKVLFHLNDEKSFSYDLFYTGDGLPVSFLKIYEDNKIIESEKFHLDVEISYVD
SN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAMSHR1132_16740 YP_005326182.1 enterotoxin sei Virulence vSa¥â Protein 6e-105 97
sei NP_372352.1 extracellular enterotoxin type I Virulence vSa¥â Protein 2e-104 96
sei NP_374935.1 extracellular enterotoxin type I Virulence vSa¥â Protein 2e-104 96
sek YP_185757.1 enterotoxin Virulence vSa1 Protein 9e-74 70
sek AAL04147.1 Sek Virulence SaPI3 Protein 7e-74 70
entK AAC28968.1 staphylococcal enterotoxin K Virulence SaPI1 Protein 2e-74 70
sek2 NP_646755.1 enterotoxin Sek Virulence ¥ÕSa3 Protein 8e-74 69
sek YP_493500.1 enterotoxin K Virulence SaPI5 Protein 2e-73 69
seg2 NP_646754.1 enterotoxin SeG Virulence ¥ÕSa3 Protein 5e-63 61
seq YP_493501.1 enterotoxin Q Virulence SaPI5 Protein 2e-62 60
sei YP_185758.1 enterotoxin type I Virulence vSa1 Protein 5e-63 60
seq AAL04146.1 Seq Virulence SaPI3 Protein 3e-63 60
entQ AAL67620.1 staphylococcal enterotoxin Q Virulence SaPI1 Protein 2e-62 60
sel AAG29598.1 sel Virulence SaPIbov Protein 1e-60 59
sel YP_005735947.1 staphylococcal enterotoxin L Virulence SaPI1 Protein 4e-60 59
unnamed AET14350.1 extracellular enterotoxin L Virulence SaPI68111 Protein 1e-60 59
sel2 NP_645577.1 extracellular enterotoxin L Virulence vSa3 Protein 3e-60 59
sel NP_372532.1 extracellular enterotoxin L Virulence vSa4 Protein 2e-60 59
sel NP_375117.1 extracellular enterotoxin L Virulence vSa4 Protein 2e-60 59
sel YP_415866.1 enterotoxin L Not tested SaPIbov Protein 2e-60 59
sem NP_372353.1 enterotoxin Virulence vSa¥â Protein 4e-62 57
sem NP_374936.1 enterotoxin SEM Virulence vSa¥â Protein 4e-62 57
SAMSHR1132_16750 YP_005326183.1 enterotoxin Virulence vSa¥â Protein 1e-59 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sek YP_005747400.1 staphylococcal enterotoxin VFG1327 Protein 3e-74 69
sek YP_005747400.1 staphylococcal enterotoxin VFG1326 Protein 2e-63 61