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Name : HMPREF0772_11178 (HMPREF0772_11178) Accession : YP_005747260.1 Strain : Staphylococcus aureus TCH60 Genome accession: NC_017342 Putative virulence/resistance : Virulence Product : leukocidin subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1252846 - 1253865 bp Length : 1020 bp Strand : + Note : - DNA sequence : ATGATTAAACAAGTATGTAAAAATATTACAATCTGTAGTTTAGCGCTATCAACAGCTTTAACTGTATTTCCAGCATCTTC TTATGCAGAAATTAAATCTAAAATTACTACAGTTTCCGAGAAGAACCTTGATGGTGATACGAAGATGTATACACGTACGG CTACAACGAGTGATACAGAGAAAAAAATCTCACAAAGCTTACAATTTAATTTTCTTACTGAGCCAAATTATGATAAAGAG ACAGTATTTATTAAGGCGAAAGGTACAATTGGCAGTGGATTGAAAATTTTAAATCCAAATGGTTATTGGAATAGTACATT AAGATGGCCTGGTTCTTATTCAGTCTCGATTCAAAACGTTGATGATAACAACAACAGTACAAATGTGACTGATTTTGCGC CTAAAAATCAAGATGAATCAAGAGAAGTTAAATATACGTATGGCTATAAAACAGGTGGAGATTTTTCAATTAATCGTGGT GGTTTAACTGGAAATATTACAAAAGAGAAAAATTATTCAGAGACAATTAGTTATCAACAACCATCTTACCGCACACTTAT TGATCAACCTACAACAAATAAAGGTGTAGCTTGGAAAGTAGAAGCACATTCTATCAATAATATGGGACATGATCATACGA GACAACTAACTAATGACAGTGATGATAGAGTGAAAAGTGAAATCTTTTCATTAACTCGAAACGGAAACCTATGGGCGAAA GATAATTTCACGCCTAAAAATAAAATGCCTGTAACTGTGTCAGAAGGATTTAATCCAGAATTTTTAGCTGTAATGTCACA CGATAAAAATGATAAAGGTAAATCAAGATTTATCGTTCATTATAAACGATCAATGGATGACTTTAAATTAGATTGGAACA AACATGGTTTCTGGGGCTATTGGTCTGGTGAAAACCATGTAGATCAAAAAGAAGAAAAATTATCAGCATTATATGAAGTT GATTGGAAGACACATGATGTAAAATTAATTAAAACAATTAATGATAAAGAACAGAAATAA Protein sequence : MIKQVCKNITICSLALSTALTVFPASSYAEIKSKITTVSEKNLDGDTKMYTRTATTSDTEKKISQSLQFNFLTEPNYDKE TVFIKAKGTIGSGLKILNPNGYWNSTLRWPGSYSVSIQNVDDNNNSTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRG GLTGNITKEKNYSETISYQQPSYRTLIDQPTTNKGVAWKVEAHSINNMGHDHTRQLTNDSDDRVKSEIFSLTRNGNLWAK DNFTPKNKMPVTVSEGFNPEFLAVMSHDKNDKGKSRFIVHYKRSMDDFKLDWNKHGFWGYWSGENHVDQKEEKLSALYEV DWKTHDVKLIKTINDKEQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lukD | NP_372343.2 | leukotoxin F-subunit | Virulence | vSa¥â | Protein | 9e-45 | 41 |
| lukD | NP_374926.1 | leukotoxin, LukD | Virulence | vSa¥â | Protein | 9e-45 | 41 |
| lukD | YP_186707.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 8e-45 | 41 |
| lukD | NP_646584.1 | leukotoxin | Virulence | vSa¥â | Protein | 8e-45 | 41 |
| lukD | YP_001332752.1 | leukocidin LukD precursor | Virulence | vSa¥â | Protein | 8e-45 | 41 |
| lukD | YP_494459.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 8e-45 | 41 |
| SAKOR_01767 | YP_008491955.1 | Leukocidin F subunit lukD | Virulence | vSa¥â | Protein | 9e-45 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HMPREF0772_11178 | YP_005747260.1 | leukocidin subunit | VFG1275 | Protein | 1e-44 | 41 |
