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Name : kdpD (HMPREF0772_11116) Accession : YP_005747198.1 Strain : Staphylococcus aureus TCH60 Genome accession: NC_017342 Putative virulence/resistance : Unknown Product : sensor histidine kinase KdpD Function : - COG functional category : - COG ID : - EC number : 2.7.3.- Position : 1183402 - 1186131 bp Length : 2730 bp Strand : - Note : COG: COG2205 DNA sequence : GTGTATGCAGAAATAAATTTTATAGCATTTAATTGTGAAGAATATTATGATATTGCTATCGAGGTGAAGGTTATGTCAAA CACTGAATCGCTAAACATAGGAAAAAAGCGTGGATCTTTAACAATTTACATCGGTTACAGTCCAGGTGTTGGTAAAACAT TTGAGATGCTTTCAAATGCCATTGAACTATTTCAAAGTAACGTTGATATTAAACTAGGATATATTGAACCGCATCAACGT GATGAAACAAATGCATTAGCTGAACAATTACCTAAAATCGCAACCAATTTTACTAAACATGGTAGTCATCATTTTCAATA TTTAGATGTCGACCGCATAATCGAAGAATCGCCGACAATAGTACTTATCGATGAGTTAGCACATACGAACATTTCTAGAG ATCGTCATGAGAAACGATATATGGATATTGAAGAAATTTTAAATCATGGTATCGATGTTCATACTACTTTGAACATTCAA CATATTGAAAGTTTAAGTAGTCAAATTGAACTGATGACCGGTGTACATGTTAAAGAACGTGTACCCGACTATTTCATAAT GAGCGCCGATGTATTAGAAGTCGTAGATATCTCACCTGAACAATTAATTAAACGCTTAAAAGCTGGCAAGGTATATAAAA AGGATAGGCTAGATGTAGCATTTAGTAATTTCTTTACGTATGCCCACCTAAGCGAACTGCGTACATTGACGTTAAGAACA GTTGCCGACTTGATGAGTGATAAAGAAAAAGTCCGACACAATCATAAAACGTCACTCAAACCTCATATTGCTGTGGCAAT TAGTGGGAGTATTTATAATGAAGCAGTAATTAAAGAGGCATTCCATATTGCTCAAAAAGAACATGCAAAATTCACTGCTA TTTATATAGATGTATTCGAAAAAAGCAGGCAATATAAAGATAGTCAAAAGCAAGTGCATCAACATCTCATGCTTGCAAAA TCTTTAGGAGCAAAAGTAAAAGTAGTTTATAGCCAAACCGTTGCATTAGGATTAGACGAATGGTGTAAAAATCAAGATGT AACCAAATTAATTATCGGACAACATATTAGAAATAAGCGGCGAGACTTTTTCAATAAACCTTTAATTGACCATTTAATGT CCTTTGAACATAGCTATAAAATCGAAATCGTTCCAATCAAACAAATACCTGTTGAATTGAAAATGAACAAATCACCCTAT CGTCCTAAAGGCAAACGGTTCGCCATAGATATGTTAAAAATGATTCTGATTCAAATAATTTGTGTAATGATGGGACTGTG GATTTATCAACTTGATAAGCATGAGTCTAGTACGATTATTTTAATGATTTTTCTCATCGGCATCATTTTGTTATCCATTT GGACGCGGTCCTACATCATTGGCTTTTTAGCAGCAATTATTAACGTATTTGTTTTTAATTATTTTTTTACGGAACCTAGA TATACATTTGAAGTATACCGCTTTGACTATCCTATTACATTTATCGTCAGCATTTTAACAAGTATTTTAACGAGTGCTTT ATTAAAACAAATTAAATTCCAATACGCCATTACTAAAAAGCAACTTTATCGTACAGATTTATTATTTCAATTTAATGATT CGATTAAACAAACTTATACAGTTGAAAACTTACTAATAAATGCTGGATACCAAATTAATCAATTATTGCAACAATCAATT ACTATATACGTTATCAATCAATCCAAAGTAATTAAAACAATACCATTGCAAAACCATATCGATAATAAGACTCAACAGCA TGAACAAGCATTAAGCTGGGTAATTAAAAATGAAAGACAAGCTGGTGCAACAACAGATACATTTCCAGGCATTAATAAAT GGTTGATACCAATTGGCACATCTCCGATTAAAGGCATTCTAGCCATTGATTACCAAAGTTCTCAAGTGATTAATCCATAT GATGCATCAATATTAGAATCAATGTTAAATGAACTTTCTCTCGCCGTTGAAAATGTGACGTTGCTTAAACAAACAAGAGA ATCCATGTTACAGGCTGAACGTCAACTGACACATTCAAATTTTTTAAGATCAATTTCGCATGACATACGTACACCGTTAA CAACAATTATGGGAAATTTAGATATTTTAGTGTCACATAGTAAAGATATGTCTATCATAGAAAAGGAACAATTACTTGTG CATAGTTTTCAAGAAAGTCAGTATTTATATCTATTAGTGACAAATATTTTATCATTAACAAAATTACAGTCATCAAATGT TCAGATAAAATTGCAACCTTATCTCGTTAGTGAATTAGTAGAAGAAATCGATATGATTTTAGAACGTCGCCATTTAAAAA AGCGTATAACTGTATCATCCTCAGTAGATTTACAGTTTATACACATTGACAGTAAGTTGATTTTACAAGCTTTATTCAAT TTGATTGAAAATGCAGTTAAACACACTTCTACTGACACCAAAATCAATTTATCTATTCGTTATGCTAGCGATGAACAAAT CGAATTTGCTGTTATAGACGAAGGACCTGGAATTAGTATAGAAGAACAACAAAAGATATTCGAGCCTTTTTACACAGGGT CAAATAAATATTTTAAAGATAACCAAAAAGAAAGCATGGGACTAGGCTTATATTTAGTACAGACTATCCTACACAAACAT CAATCAAACCTACAATATAAACCGAACCAACCACATGGCAGTATATTCTATTTCAATATAGATACAGACTTTAATGAAGG AGACATATAA Protein sequence : MYAEINFIAFNCEEYYDIAIEVKVMSNTESLNIGKKRGSLTIYIGYSPGVGKTFEMLSNAIELFQSNVDIKLGYIEPHQR DETNALAEQLPKIATNFTKHGSHHFQYLDVDRIIEESPTIVLIDELAHTNISRDRHEKRYMDIEEILNHGIDVHTTLNIQ HIESLSSQIELMTGVHVKERVPDYFIMSADVLEVVDISPEQLIKRLKAGKVYKKDRLDVAFSNFFTYAHLSELRTLTLRT VADLMSDKEKVRHNHKTSLKPHIAVAISGSIYNEAVIKEAFHIAQKEHAKFTAIYIDVFEKSRQYKDSQKQVHQHLMLAK SLGAKVKVVYSQTVALGLDEWCKNQDVTKLIIGQHIRNKRRDFFNKPLIDHLMSFEHSYKIEIVPIKQIPVELKMNKSPY RPKGKRFAIDMLKMILIQIICVMMGLWIYQLDKHESSTIILMIFLIGIILLSIWTRSYIIGFLAAIINVFVFNYFFTEPR YTFEVYRFDYPITFIVSILTSILTSALLKQIKFQYAITKKQLYRTDLLFQFNDSIKQTYTVENLLINAGYQINQLLQQSI TIYVINQSKVIKTIPLQNHIDNKTQQHEQALSWVIKNERQAGATTDTFPGINKWLIPIGTSPIKGILAIDYQSSQVINPY DASILESMLNELSLAVENVTLLKQTRESMLQAERQLTHSNFLRSISHDIRTPLTTIMGNLDILVSHSKDMSIIEKEQLLV HSFQESQYLYLLVTNILSLTKLQSSNVQIKLQPYLVSELVEEIDMILERRHLKKRITVSSSVDLQFIHIDSKLILQALFN LIENAVKHTSTDTKINLSIRYASDEQIEFAVIDEGPGISIEEQQKIFEPFYTGSNKYFKDNQKESMGLGLYLVQTILHKH QSNLQYKPNQPHGSIFYFNIDTDFNEGDI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpD | NP_370595.1 | sensor protein KdpD | Not tested | Type-II SCCmec | Protein | 0.0 | 59 |
| kdpD | NP_373307.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 0.0 | 59 |
| SH0032 | YP_251947.1 | hypothetical protein | Not tested | SCCmec | Protein | 0.0 | 59 |
| kdpD | YP_190032.1 | sensor histidine kinase KdpD | Not tested | Type-II SCCmec | Protein | 0.0 | 59 |
| SAR0069 | YP_039537.1 | sensor kinase | Not tested | Type-II SCCmec | Protein | 0.0 | 59 |
