Gene Information

Name : sem (SAA6008_00840)
Accession : YP_005744211.1
Strain : Staphylococcus aureus JKD6008
Genome accession: NC_017341
Putative virulence/resistance : Virulence
Product : staphylococcal enterotoxin type I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 906498 - 907226 bp
Length : 729 bp
Strand : -
Note : -

DNA sequence :
ATGAATAAAATATTTAGAATACTCACTGTTAGCTTGTTTTTCTTCACATTTTTAATAAAAAACAATCTAGCATATGCTGA
TGTAGGGGTAATCAACCTTAGAAACTTTTATGCTAATTATGAACCTGAAAAGCTTCAAGGAGTTAGTTCTGGAAATTTTT
CTACTTCTCATCAATTAGAGTATATTGATGGAAAATACACTTTATATTCACAGTTTCATAATGAATATGAAGCGAAGAGA
TTAAAAGATCATAAAGTAGATATCTTTGGAATAAGTTACTCAGGTCTTTGTAATACAAAATATATGTATGGTGGAATTAC
GTTGGCGAATCAAAATTTAGATAAACCTAGAAATATACCTATTAATCTCTGGGTCAATGGTAAGCAAAATACTATATCTA
CAGACAAAGTTTCTACTCAAAAAAAAGAGGTAACTGCTCAAGAGATTGATATTAAGTTACGAAAATACCTACAAAACGAA
TACAATATATATGGTTTTAATAAAACAAAAAAAGGTCAGGAATATGGATATCAGTCAAAATTTAATTCTGGGTTTAACAA
AGGAAAAATTACTTTCCATTTAAATAATGAACCTTCTTTTACATACGATTTGTTTTACACCGGAACTGGTCAAGCAGAGA
GTTTTTTAAAAATTTACAATGATAATAAAACTATAGATGCAGAGAATTTTCATTTGGATGTAGAGATTTCATATGAGAAA
ACTGAATAA

Protein sequence :
MNKIFRILTVSLFFFTFLIKNNLAYADVGVINLRNFYANYEPEKLQGVSSGNFSTSHQLEYIDGKYTLYSQFHNEYEAKR
LKDHKVDIFGISYSGLCNTKYMYGGITLANQNLDKPRNIPINLWVNGKQNTISTDKVSTQKKEVTAQEIDIKLRKYLQNE
YNIYGFNKTKKGQEYGYQSKFNSGFNKGKITFHLNNEPSFTYDLFYTGTGQAESFLKIYNDNKTIDAENFHLDVEISYEK
TE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
entQ AAL67620.1 staphylococcal enterotoxin Q Virulence SaPI1 Protein 8e-108 100
seq AAL04146.1 Seq Virulence SaPI3 Protein 6e-108 99
seg2 NP_646754.1 enterotoxin SeG Virulence ¥ÕSa3 Protein 3e-107 99
sei YP_185758.1 enterotoxin type I Virulence vSa1 Protein 8e-108 99
seq YP_493501.1 enterotoxin Q Virulence SaPI5 Protein 3e-106 98
sem NP_372353.1 enterotoxin Virulence vSa¥â Protein 4e-64 62
sem NP_374936.1 enterotoxin SEM Virulence vSa¥â Protein 4e-64 62
SAMSHR1132_16740 YP_005326182.1 enterotoxin sei Virulence vSa¥â Protein 1e-62 61
SAMSHR1132_16750 YP_005326183.1 enterotoxin Virulence vSa¥â Protein 2e-63 60
sei NP_372352.1 extracellular enterotoxin type I Virulence vSa¥â Protein 2e-61 60
sei NP_374935.1 extracellular enterotoxin type I Virulence vSa¥â Protein 2e-61 60
sek2 NP_646755.1 enterotoxin Sek Virulence ¥ÕSa3 Protein 6e-58 60
entK AAC28968.1 staphylococcal enterotoxin K Virulence SaPI1 Protein 8e-58 59
sek YP_185757.1 enterotoxin Virulence vSa1 Protein 3e-57 59
sek YP_493500.1 enterotoxin K Virulence SaPI5 Protein 2e-57 59
sek AAL04147.1 Sek Virulence SaPI3 Protein 2e-57 59
sel YP_415866.1 enterotoxin L Not tested SaPIbov Protein 6e-55 57
sel YP_005735947.1 staphylococcal enterotoxin L Virulence SaPI1 Protein 1e-54 57
sel AAG29598.1 sel Virulence SaPIbov Protein 4e-55 57
sel2 NP_645577.1 extracellular enterotoxin L Virulence vSa3 Protein 9e-55 57
unnamed AET14350.1 extracellular enterotoxin L Virulence SaPI68111 Protein 4e-55 57
sel NP_372532.1 extracellular enterotoxin L Virulence vSa4 Protein 6e-55 57
sel NP_375117.1 extracellular enterotoxin L Virulence vSa4 Protein 6e-55 57
seeI YP_002747252.1 exotoxin I precursor Virulence ¥ÕSeq4 Protein 3e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sem YP_005744211.1 staphylococcal enterotoxin type I VFG1326 Protein 1e-107 99
sem YP_005744211.1 staphylococcal enterotoxin type I VFG1327 Protein 3e-58 60
sem YP_005744211.1 staphylococcal enterotoxin type I VFG0952 Protein 2e-31 41