Gene Information

Name : int (SAA6008_00838)
Accession : YP_005744209.1
Strain : Staphylococcus aureus JKD6008
Genome accession: NC_017341
Putative virulence/resistance : Unknown
Product : pathogenicity island protein, integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 904438 - 905658 bp
Length : 1221 bp
Strand : -
Note : -

DNA sequence :
ATGTGGTTTGAAAAATTTAAAAATAAGAATAAAGAAACTAAATATAGATATTACGAGAAGTACAAAGACCCACTCACAAA
CAAATGGCGACGTGTTAGTGTGGTTCTTAATAAGAATGGTAAGCAATCACAAAAAGAAGCTCAAAGGCTCTTAAATGAGC
GTATAGAAGCAAAACTGAATGATAAGACACCTACTACACTTAAGTCACTAACTTTTCATGCTGCAAGTGATGAGTGGTTT
CAGAACTATATCAAAACGTCTGGGTCAAAAAGAACGACTATTAAAACTAAATTGAGTAAGCTAAACACTTTGAAGAAATT
TGTAGATGAAGATATTTTAATCAATAAAATAACACTTTCATATGCGCAACAAGTTTTCGATGAAATGGATAGTAAAGGTT
ATGTATATCAAGTTAACAAAGATGCGTTAAGCATATTCAAAAATGTATTTGAATACACTAGACGCATCTATAAACTGCAA
GATTTAGAATTTTTAAAAGATATAACGTTAAATAAAAGAATTAAGTCTTATGATGAAGTGAAAGCTAAACGTAATAAGTA
CCTCGAATTAAATGAAATACAATCTATCATCAAAGATATTAATATGAAGGCTCAGAAGATGCACTCAGGTATCCATAAGC
GGTTTTATTTATTCGTTGCACTCATGACAGAATTCCAAGCCTTAAATGGTATGCGTATTGGTGAAATGTTAGCCATTCAA
AATGAAGATATAGACTTTGATAATAAGAGTTTAAATATTAACGGAACAATCCATTGGTTTCACGATGAATCTGGTGGATT
CGGTGTAAAAGATACCACTAAAACAGAGTCTAGTTATAGAACAATTGGATTGAGTAGCAGAAGTTGCGAGATATTAAAGA
AAGCAATACTGGAGAACAAAAAGGATTCAAAATGGAATGATGGATATCTAAATAGAAATTTTGTGTTTACTAATCATAAA
GGCAACCCAATGCAGACTGAAAGATTCAATAAAATCCTTAGGGAAGCAGCTAAAGATGTTGGTATTGATAAAGAAGTTTC
TTCACATATATTAAGACATAGCCACATATCATTACTCTCTCAACAAGGCGTGTCACTTAAAGCTATTATGGATCGTGTAG
GCCATTCCGACCACCGTACAACACTTTCCATTTATTCTCACGTTACTGAACAGATGGATAAGGATATGATGAACAAACTT
GAACAAGTAAAACTTGGATAA

Protein sequence :
MWFEKFKNKNKETKYRYYEKYKDPLTNKWRRVSVVLNKNGKQSQKEAQRLLNERIEAKLNDKTPTTLKSLTFHAASDEWF
QNYIKTSGSKRTTIKTKLSKLNTLKKFVDEDILINKITLSYAQQVFDEMDSKGYVYQVNKDALSIFKNVFEYTRRIYKLQ
DLEFLKDITLNKRIKSYDEVKAKRNKYLELNEIQSIIKDINMKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEMLAIQ
NEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAILENKKDSKWNDGYLNRNFVFTNHK
GNPMQTERFNKILREAAKDVGIDKEVSSHILRHSHISLLSQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKL
EQVKLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAL04148.1 integrase-like protein Not tested SaPI3 Protein 2e-158 99
int AAC28969.1 integrase Not tested SaPI1 Protein 8e-160 99
int YP_493499.1 integrase Not tested SaPI5 Protein 1e-157 99
SACOL0885 YP_185756.1 pathogenicity island protein, integrase Not tested vSa1 Protein 2e-158 99
SAAV_0787 YP_003281710.1 pathogenicity island protein, integrase Virulence SaPIAv Protein 6e-157 98
SAR0366 YP_039823.1 integrase Not tested SaPI4 Protein 2e-68 47
int NP_646259.1 integrase Not tested ¥ÕSa2 Protein 1e-61 45
SAUSA300_1438 YP_494135.1 phiSLT ORF401-like protein, integrase Not tested ¥ÕSa2 Protein 1e-61 45
SAOV_0274 YP_005735791.1 putative prophage integrase Not tested ¥ÕSa1 Protein 2e-62 45