Gene Information

Name : SAA6008_9980 (SAA6008_9980)
Accession : YP_005743455.1
Strain : Staphylococcus aureus JKD6008
Genome accession: NC_017341
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 62483 - 62833 bp
Length : 351 bp
Strand : -
Note : -

DNA sequence :
ATGACACTAGAAAAACAACTCAAAGAGTATATAACTAACTTATTCAATCTGCCAAAGGACGAAAAATGGGAATGTGAATC
TATCGAGGAAGTGGCAGATAATATCCTTCCTGATCAATATATCAGACTTGGTCCGCTTACCAACAAAATCCTTCATACGT
ATACTTACTACTCTGACACACTTCATGAAAGGCATATATACCCCTTTATCCTCTACTATCAAAAACAACTTATTGCGATT
GGTTATATTGATGAAACAAACGATATGGACTTCTTATATCTTCATAACACAGTTATGCCACTACTAGATCAAAGACACTT
ACTTGAAAAGGAGAATTATAATAATGAATAA

Protein sequence :
MTLEKQLKEYITNLFNLPKDEKWECESIEEVADNILPDQYIRLGPLTNKILHTYTYYSDTLHERHIYPFILYYQKQLIAI
GYIDETNDMDFLYLHNTVMPLLDQRHLLEKENYNNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47598.1 hypothetical protein Not tested Type-III SCCmec Protein 2e-49 100
unnamed AAL26663.1 unknown Not tested SCCcap1 Protein 5e-42 84
SSP0047 YP_300137.1 hypothetical protein Not tested SCC15305cap Protein 8e-41 84
SARLGA251_00350 YP_005754050.1 hypothetical protein Not tested Type-XI SCCmec Protein 1e-40 84
SSP0034 YP_300124.1 hypothetical protein Not tested SCC15305RM Protein 1e-40 82
unnamed ACL99833.1 hypothetical protein Not tested Type-V SCCmec Protein 3e-40 80
unnamed BAG06192.1 hypothetical protein Not tested Type-VII SCCmec Protein 3e-40 80
unnamed BAB47671.1 hypothetical protein Not tested Type-III SCCmec Protein 9e-39 80
unnamed BAC53833.1 hypothetical protein Not tested SRImec-III and SCCmec-III region Protein 9e-39 80
SAS0031 YP_042164.1 hypothetical protein Not tested SCC476 Protein 1e-21 54
unnamed BAB83488.1 - Not tested SCC 12263 Protein 6e-27 53
SE0055 NP_763610.1 hypothetical protein Not tested SCCpbp4 Protein 4e-21 53
SAPIG0051 YP_005732861.1 hypothetical protein Not tested Type-V SCCmec Protein 1e-26 52
unnamed BAB72110.1 hypothetical protein Not tested Type-IVa SCCmec Protein 2e-19 52
unnamed BAB72129.1 hypothetical protein Not tested Type-IVb SCCmec Protein 2e-19 52
SE0033 NP_763588.1 hypothetical protein Not tested SCCpbp4 Protein 6e-19 52
unnamed BAC67562.1 hypothetical protein Not tested Type-IVc SCCmec Protein 2e-19 52
SAMSHR1132_00390 YP_005324562.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 3e-19 52
unnamed BAA94329.1 hypothetical protein Not tested Type-I SCCmec Protein 4e-21 52
MW0037 NP_644852.1 hypothetical protein Not tested Type-IV SCCmec Protein 3e-19 52
SACOL0040 YP_184951.1 hypothetical protein Not tested Type-I SCCmec Protein 5e-21 52
unnamed BAG06213.1 hypothetical protein Not tested Type-VII SCCmec Protein 9e-27 52
unnamed ACL99845.1 hypothetical protein Not tested Type-V SCCmec Protein 1e-26 52
SH0057 YP_251972.1 hypothetical protein Not tested SCCmec Protein 2e-26 51
unnamed BAB46981.2 hypothetical protein Not tested Type-IIIinv SCCmec Protein 4e-25 51
unnamed BAD24835.1 hypothetical protein Not tested Type-V SCCmec Protein 5e-26 50
SERP2501 YP_190043.1 hypothetical protein Not tested Type-II SCCmec Protein 5e-21 49
unnamed BAA94661.1 - Not tested Type-II SCCmec Protein 3e-21 49
SAV0060 NP_370584.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-20 49
SAR0058 YP_039529.1 hypothetical protein Not tested Type-II SCCmec Protein 5e-21 49
SA0056 NP_373296.1 hypothetical protein Not tested Type-II SCCmec Protein 5e-21 49