Gene Information

Name : SAA6008_00056 (SAA6008_00056)
Accession : YP_005743454.1
Strain : Staphylococcus aureus JKD6008
Genome accession: NC_017341
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 62087 - 62482 bp
Length : 396 bp
Strand : -
Note : -

DNA sequence :
ATGGATACACATAGCTCAGATAAGCGTCACAGTCATTACAGAAGTTATTACAATAATGAAAGATATAGAAAAGGAGAAAT
GAGCATGAAACGTTATATTACACGTAGTATTGCCAATTACTTGCCAGCAATGTTGCAGCAACAGTTATGGAAACTTGTAG
CGCAACGCGAAAACGAACAATTCAAGGAACTAGAAGAGATTGATTACTTTCATATATTCCAGTTCAATATGCATAATAGT
CAATTATATATCAAACATAAGCAAGAACGTCCAGAGTACGTAAAAATTCATAAGGCAAATTATTCAAAAGCTATCAATAT
TAATAAGGTCTACATTATCCGAGAAGATGATGTAGACCTTTCTTATTACGTCATGTTGTTACCTGAAGAATATTAA

Protein sequence :
MDTHSSDKRHSHYRSYYNNERYRKGEMSMKRYITRSIANYLPAMLQQQLWKLVAQRENEQFKELEEIDYFHIFQFNMHNS
QLYIKHKQERPEYVKIHKANYSKAININKVYIIREDDVDLSYYVMLLPEEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47601.1 hypothetical protein Not tested Type-III SCCmec Protein 7e-57 100
unnamed BAB47670.1 hypothetical protein Not tested Type-III SCCmec Protein 5e-39 89
unnamed BAC53832.1 hypothetical protein Not tested SRImec-III and SCCmec-III region Protein 5e-39 89
SSP0048 YP_300138.1 hypothetical protein Not tested SCC15305cap Protein 9e-39 88
SARLGA251_00340 YP_005754049.1 hypothetical protein Not tested Type-XI SCCmec Protein 5e-37 84
unnamed ACL99834.1 hypothetical protein Not tested Type-V SCCmec Protein 7e-37 81
unnamed BAG06193.1 hypothetical protein Not tested Type-VII SCCmec Protein 7e-37 81
SAPIG0036 YP_005732846.1 hypothetical protein Not tested Type-V SCCmec Protein 1e-36 81
unnamed AAL26664.1 unknown Not tested SCCcap1 Protein 6e-31 78
SSP0032 YP_300122.1 hypothetical protein Not tested SCC15305RM Protein 7e-34 73
unnamed BAB46980.2 hypothetical protein Not tested Type-IIIinv SCCmec Protein 3e-18 50
unnamed BAA94662.1 - Not tested Type-II SCCmec Protein 8e-17 49
SAR0057 YP_039528.1 hypothetical protein Not tested Type-II SCCmec Protein 1e-16 49
SAV0059 NP_370583.1 hypothetical protein Not tested Type-II SCCmec Protein 1e-16 49
SA0055 NP_373295.1 hypothetical protein Not tested Type-II SCCmec Protein 1e-16 49
unnamed BAB83490.1 - Not tested SCC 12263 Protein 9e-16 49
SERP2503 YP_190045.1 hypothetical protein Not tested Type-II SCCmec Protein 1e-16 49
SACOL0038 YP_184949.1 hypothetical protein Not tested Type-I SCCmec Protein 2e-16 49
unnamed BAB72111.1 hypothetical protein Not tested Type-IVa SCCmec Protein 2e-15 48
SAMSHR1132_00370 YP_005324561.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 2e-15 48
unnamed BAB72130.1 hypothetical protein Not tested Type-IVb SCCmec Protein 2e-15 48
SAS0030 YP_042163.1 hypothetical protein Not tested SCC476 Protein 2e-15 48
unnamed BAC67563.1 hypothetical protein Not tested Type-IVc SCCmec Protein 2e-15 48
MW0036 NP_644851.1 hypothetical protein Not tested Type-IV SCCmec Protein 2e-15 48
SE0031 NP_763586.1 hypothetical protein Not tested SCCpbp4 Protein 2e-15 48
SH0058 YP_251973.1 hypothetical protein Not tested SCCmec Protein 1e-15 48
SAPIG0052 YP_005732862.1 hypothetical protein Not tested Type-V SCCmec Protein 6e-16 48
SE0053 NP_763608.1 hypothetical protein Not tested SCCpbp4 Protein 6e-16 48
unnamed BAD24837.1 hypothetical protein Not tested Type-V SCCmec Protein 8e-16 48
unnamed BAA94330.1 hypothetical protein Not tested Type-I SCCmec Protein 8e-17 48
unnamed BAG06214.1 hypothetical protein Not tested Type-VII SCCmec Protein 5e-16 47
unnamed ACL99846.1 hypothetical protein Not tested Type-V SCCmec Protein 4e-16 47