Gene Information

Name : tnpB_1 (SAA6008_00052)
Accession : YP_005743450.1
Strain : Staphylococcus aureus JKD6008
Genome accession: NC_017341
Putative virulence/resistance : Unknown
Product : transposition regulatory protein TnpB_1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 58936 - 60828 bp
Length : 1893 bp
Strand : -
Note : -

DNA sequence :
ATGAATGCTTCTAGTAAAAGGAAAATTATCAGTCAGAGTGAGATCAGCAAAAAAATAGCTGTAATGAATGAAGAAATGCA
AGGGTTTTGGGCTAATAATAGTTGGGATATAAGAAAATGTCCACATCCTTCTGCCATAGAATTAAGTAAGAATCCTGCTT
TAAGAAATCGTTGGGTTCGTTTTGAACGTGTTAAAAATCTGTGGTTAAGAACAGAATTGAAATATTTTTATTTTTACCAT
TTAAACAATGGAATATGGAATGCAAAAACTGTCTGGATTAGAAAAGGAACAGTAATTAATAAAATGTTGGATTTTTTAGA
TTTAAAGTATCCCAGCATTACTTCAATTACTGAAGTTCCTATTGATAAAGCAATGACGGAGTATAGAACATATTTGACAA
AACAGGGTGTTAGAATTACCACCACTAATTATAAGATTACTGCTAATCAAGAAAAAACACCTGTAAAAGCTAATTCTTAC
TATGTTACTAATCTTAAACAATTTATTGAGTTTTATGAGGATTTTTATTTTGATGGAGAGGAGTGGGATAAAGACGTTTG
GGATAGACGAAACTTACCTTTGCCAGATGATAAGGTTAACCCAACACAATATGAATATACAATTAACTTTAAAGGGTTTC
GGAATACATATTTTAAACAGCTTGTAAAAAGATATTGTAAGTTAAGATTGAACATGGATAGCTTTTCCTATGTAAGTGAT
ATTGCCCAAAAACTTAAAGAGTTCTTTAATTTTCTGGACATAAAGTTTAAACACGTTCAGAGAGTACACCAATTAACGAG
AGTGGAAATTGAAGCATATTTAAGTGAACTAAACATGATGGGGATAAAACCTAGTACAATAACTGGGAGGATCTCTATAT
TGGAAGGACTATTTAGTACCCTTCATAGGCTAGAATGGGATGATGTTCCTTCCAAATTATTAATTTATCCCGAGGACTAT
CCGAAAATACCAAGAGCAAAACCTCGCTTTATAGACGAATTCGTTCTAGAGCAATTGAACAGTCATCTTGATAAATTACC
CGAATATATAGCTACGATGACTATGATTGTTCAAGAATGTGGAATGAGGATAAGTGAATTGTGCACCTTGAAAAAAGGCT
GTTTATTAGAGGACAAAGATGGAGATTACTTTTTAAAGTATTATCAATGGAAAATGAAAAAGGAGCATATAGTTCCAATA
TCTAAAGAGGTAGTTTTACTTATTAAAGTTCGGGAAGATAAAGTTTCAGAGGAATTTCCAGATAGTGAATACCTCTTTCC
AAGAAAAGATGGATCGCCATTAAAACAAGAAACATTTAGAGGCGAATTAAATAAATTAGCTTATGAGCAAAATATAGTGG
ATAAATTAGGCGAGATTTATAGATTCCATGCCCATGCCTTTCGCCATTCAGTAGGAACAAGAATGATTAACAACGGGGTG
CCCCAGCATATTGTGCAGAAATTTTTGGGACATGAAAGCCCAGAAATGACAAGCAGATACGCTCATATCTTTGATGAAAC
TCTAAAAAATGAATTTACTAAATTTCAAGAAAAACTGGTTACCAATAATGGAGATGTGCTCAATCTAGATGATGATAGTG
AAGTCGATGATGTAGAGCTTCAATGGTTCAAGAAAAATATAAATGCACAAGTGCTTCCAAATGGTTATTGTAGATTGCCA
GTAATAGCAGGTGGTTGTCCACATGCGAATGCATGCTTAGATTGCACTCACTTCTGTACCAGTAAGCAATTCTTACCACA
GCACGAAGAACAGTTAGAGCGTACAGAAGAGTTATTAACCATAGCAAAGGATAAACAATGGCAAAGACAAATAGAGACTA
ATAGCCGTGTTAAAGAGCGTTTAGAACAAATCATTGGAAGTTTAACGGGGTAA

Protein sequence :
MNASSKRKIISQSEISKKIAVMNEEMQGFWANNSWDIRKCPHPSAIELSKNPALRNRWVRFERVKNLWLRTELKYFYFYH
LNNGIWNAKTVWIRKGTVINKMLDFLDLKYPSITSITEVPIDKAMTEYRTYLTKQGVRITTTNYKITANQEKTPVKANSY
YVTNLKQFIEFYEDFYFDGEEWDKDVWDRRNLPLPDDKVNPTQYEYTINFKGFRNTYFKQLVKRYCKLRLNMDSFSYVSD
IAQKLKEFFNFLDIKFKHVQRVHQLTRVEIEAYLSELNMMGIKPSTITGRISILEGLFSTLHRLEWDDVPSKLLIYPEDY
PKIPRAKPRFIDEFVLEQLNSHLDKLPEYIATMTMIVQECGMRISELCTLKKGCLLEDKDGDYFLKYYQWKMKKEHIVPI
SKEVVLLIKVREDKVSEEFPDSEYLFPRKDGSPLKQETFRGELNKLAYEQNIVDKLGEIYRFHAHAFRHSVGTRMINNGV
PQHIVQKFLGHESPEMTSRYAHIFDETLKNEFTKFQEKLVTNNGDVLNLDDDSEVDDVELQWFKKNINAQVLPNGYCRLP
VIAGGCPHANACLDCTHFCTSKQFLPQHEEQLERTEELLTIAKDKQWQRQIETNSRVKERLEQIIGSLTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47606.1 transposase B of Transposon Tn554 Not tested Type-III SCCmec Protein 0.0 100
tnpB BAC57490.1 transposaseB Not tested Type-IIIinv SCCmec Protein 0.0 99
tnpB BAC57471.1 transposase B Not tested Type-IIIinv SCCmec Protein 0.0 99
tnpB-3 YP_190049.1 transposase B Not tested Type-II SCCmec Protein 0.0 97
tnpB BAB47666.1 transposase B(Tn554) Not tested Type-III SCCmec Protein 0.0 97
tnpB BAC53828.1 transposase B(Tn554) Not tested SRImec-III and SCCmec-III region Protein 0.0 97
tnpB BAA82202.1 transposaseB Not tested Type-II SCCmec Protein 0.0 97
tnpB1 YP_039525.1 transposase B 1 Not tested Type-II SCCmec Protein 0.0 97
tnpB NP_370579.1 transposase B Not tested Type-II SCCmec Protein 0.0 97
tnpB NP_373291.1 transposase B for Tn554 Not tested Type-II SCCmec Protein 0.0 97