Gene Information

Name : set6 (SAA6008_00422)
Accession : YP_005743802.1
Strain : Staphylococcus aureus JKD6008
Genome accession: NC_017341
Putative virulence/resistance : Virulence
Product : superantigen-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 460078 - 460758 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGAAATTTAAAGCGATAGCAAAAGCAAGTTTAGCATTGGGAATGTTAGCAACAGGTGTAATTACATCGAATGTACAATC
AGTACAAGCGAAAGCAGAAGTTAAACAACAAAGTGAATCAGAGTTAAAACACTATTATAATAAACCAATTTTAGAGCGTA
AAAATGTGACTGGATTTAAATATACTGATGAGGGTAAACACTATTTAGAAGTCACAGTAGGGCAACAGCATTCTCGAATC
ACTTTACTTGGATCTGATAAAGATAAATTTAAAGACGGAGAAAACTCAAATATAGATGTGTTTATCCTTAGAGAAGGTGA
CAGTAGACAAGCAACAAATTACTCAATTGGTGGCGTTACAAAATCAAATAGTGTGCAGTATATTGATTATATCAATACGC
CAATTTTAGAAATCAAGAAAGATAATGAAGATGTACTTAAAGATTTTTACTACATTTCAAAAGAAGACATCTCATTAAAA
GAACTTGATTATAGATTAAGAGAACGTGCGATTAAACAACACGGCTTGTATTCAAATGGTCTTAAACAAGGTCAAATTAC
AATTACAATGAATGATGGCACAACACATACAATCGATTTAAGTCAAAAACTTGAAAAAGAACGTATGGGTGAGTCAATCG
ACGGCACTAAGATTAATAAAATTCTAGTAGAAATGAAATAA

Protein sequence : 
MKFKAIAKASLALGMLATGVITSNVQSVQAKAEVKQQSESELKHYYNKPILERKNVTGFKYTDEGKHYLEVTVGQQHSRI
TLLGSDKDKFKDGENSNIDVFILREGDSRQATNYSIGGVTKSNSVQYIDYINTPILEIKKDNEDVLKDFYYISKEDISLK
ELDYRLRERAIKQHGLYSNGLKQGQITITMNDGTTHTIDLSQKLEKERMGESIDGTKINKILVEMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SACOL0468 YP_185358.1 superantigen-like protein Virulence vSa¥á Protein 1e-101 100
set1nm YP_001331422.1 superantigen-like protein Virulence vSa¥á Protein 1e-101 100
SAUSA300_0395 YP_493109.1 superantigen-like protein Virulence vSa¥á Protein 1e-101 100
SAKOR_00404 YP_008490588.1 Exotoxin Virulence vSa¥á Protein 4e-99 97
set6 NP_370946.1 superantigen-like protein Virulence vSa¥á Protein 3e-86 84
set6 NP_373632.1 superantigen-like protein Virulence vSa¥á Protein 3e-86 84
SAR0422 YP_039874.1 superantigen-like protein Virulence vSa¥á Protein 4e-71 70
SAS0384 YP_042509.1 superantigen-like protein Virulence vSa¥á Protein 2e-68 69
set16 NP_645199.1 superantigen-like protein Virulence vSa¥á Protein 2e-68 69
SAMSHR1132_03720 YP_005324894.1 exotoxin Virulence vSa¥á Protein 1e-66 67
SAKOR_00417 YP_008490601.1 Exotoxin Not tested vSa¥á Protein 2e-39 45
SACOL0478 YP_185368.1 superantigen-like protein Virulence vSa¥á Protein 2e-36 44
set11nm YP_001331434.1 superantigen-like protein Virulence vSa¥á Protein 2e-36 44
SAUSA300_0407 YP_493121.1 superantigen-like protein Virulence vSa¥á Protein 2e-36 44
SAR0435 YP_039886.1 superantigen-like protein Virulence vSa¥á Protein 1e-38 44
set20 NP_645203.1 superantigen-like protein 5 Virulence vSa¥á Protein 5e-42 44
SAS0388 YP_042513.1 superantigen-like protein 5 Virulence vSa¥á Protein 5e-42 44
SAS0396 YP_042522.1 superantigen-like protein Virulence vSa¥á Protein 5e-40 43
set26 NP_645211.1 superantigen-like protein Virulence vSa¥á Protein 5e-40 43
set5nm YP_001331426.1 superantigen-like protein 5 Virulence vSa¥á Protein 4e-42 43
SAUSA300_0399 YP_493113.1 superantigen-like protein 5 Virulence vSa¥á Protein 4e-42 43
set3 YP_039879.1 superantigen-like protein 5 Virulence vSa¥á Protein 2e-41 43
set10 NP_370949.1 superantigen-like protein 5 Virulence vSa¥á Protein 5e-42 43
set10 NP_373636.1 superantigen-like protein 5 Virulence vSa¥á Protein 5e-42 43
SAKOR_00409 YP_008490593.1 Exotoxin Virulence vSa¥á Protein 1e-42 43
set15 NP_373644.1 superantigen-like protein Virulence vSa¥á Protein 1e-38 42
set15 NP_370957.1 superantigen-like protein Virulence vSa¥á Protein 1e-38 42
SAS0389 YP_042514.1 superantigen-like protein Virulence vSa¥á Protein 1e-29 41
set21 NP_645204.1 superantigen-like protein Virulence vSa¥á Protein 1e-29 41
SAMSHR1132_03750 YP_005324897.1 exotoxin 3 Virulence vSa¥á Protein 2e-38 41