Gene Information

Name : SAA6008_00034 (SAA6008_00034)
Accession : YP_005743434.1
Strain : Staphylococcus aureus JKD6008
Genome accession: NC_017341
Putative virulence/resistance : Resistance
Product : kanamycin nucleotidyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 40967 - 41710 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence :

ATGACTAGAGAAGAAAGAATGAAGATTGTTCATGAAATTAAGGAACGAATATTGGATAAATATGGGGATGATGTTAAGGC
TATTGGTGTTTATGGCTCTCTTGGTCGTCAGACTGATGGGCCCTATTCGGATATTGAGATGATGTGTGTCATGTCAACAG
AGGAAGCAGAGTTCAGCCATGAATGGACAACCGGTGAGTGGAAGGTGGAAGTGAATTTTGATAGCGAAGAGATTCTACTA
GATTATGCATCTCAGGTGGAATCAGATTGGCCGCTTACACATGGTCAATTTTTCTCTATTTTGCCGATTTATGATTCAGG
TGGATACTTAGAGAAAGTGTATCAAACTGCTAAATCGGTAGAAGCCCAAACGTTCCACGATGCGATTTGTGCCCTTATCG
TAGAAGAGCTGTTTGAATATGCAGGCAAATGGCGTAATATTCGTGTGCAAGGACCGACAACATTTCTACCATCCTTGACT
GTACAGGTAGCAATGGCAGGTGCCATGTTGATTGGTCTGCATCATCGCATCTGTTATACGACGAGCGCTTCGGTCTTAAC
TGAAGCAGTTAAGCAATCAGATCTTCCTTCAGGTTATGACCATCTGTGCCAGTTCGTAATGTCTGGTCAACTTTCCGACT
CTGAGAAACTTCTGGAATCGCTAGAGAATTTCTGGAATGGGATTCAGGAGTGGACAGAACGACACGGATATATAGTGGAT
GTGTCAAAACGCATACCATTTTGA

Protein sequence :

MTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGRQTDGPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFDSEEILL
DYASQVESDWPLTHGQFFSILPIYDSGGYLEKVYQTAKSVEAQTFHDAICALIVEELFEYAGKWRNIRVQGPTTFLPSLT
VQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSDSEKLLESLENFWNGIQEWTERHGYIVD
VSKRIPF

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
knt	YP_039510.1	kanamycin nucleotidyltransferase	Not tested	Type-II SCCmec	Protein	2e-108	100
aadD	NP_370559.1	kanamycin nucleotidyltransferase	Not tested	Type-II SCCmec	Protein	2e-108	100
aadD	NP_373273.1	kanamycin nucleotidyltransferase	Not tested	Type-II SCCmec	Protein	2e-108	100
ant(4')	BAA82229.1	O-nucleotidyltransferase(4')	Not tested	Type-II SCCmec	Protein	2e-108	100

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
SAA6008_00034	YP_005743434.1	kanamycin nucleotidyltransferase	NC_002758.1119996.p0	Protein	1e-108	100
SAA6008_00034	YP_005743434.1	kanamycin nucleotidyltransferase	NC_005024.2598350.p0	Protein	1e-108	100
SAA6008_00034	YP_005743434.1	kanamycin nucleotidyltransferase	NC_012547.7751507.p0	Protein	1e-108	100
SAA6008_00034	YP_005743434.1	kanamycin nucleotidyltransferase	NC_002745.1122807.p0	Protein	1e-108	100
SAA6008_00034	YP_005743434.1	kanamycin nucleotidyltransferase	NC_009782.5559990.p0	Protein	1e-108	100
SAA6008_00034	YP_005743434.1	kanamycin nucleotidyltransferase	NC_013034.8207357.p0	Protein	1e-108	100