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Name : SAA6008_00346 (SAA6008_00346) Accession : YP_005743732.1 Strain : Staphylococcus aureus JKD6008 Genome accession: NC_017341 Putative virulence/resistance : Unknown Product : pathogenicity island protein, integrase Function : - COG functional category : - COG ID : - EC number : - Position : 391631 - 392845 bp Length : 1215 bp Strand : - Note : - DNA sequence : ATGTGGGTTCGTGAAATCACCAAAAACAATAGTACGGCCTATCGCTATTTAGAGCGCTATACAGACCCTTTAACTGGCAA GTATAAAACAGTATCAGTTACACGTAACAAGAATAATGTACGTAGCCAAAAGGACGCTCAATTAGAATTAAATAAAATAA TTGAGCAACGTTTGAAACATTACAGTACGAAACAACTTGAAAACTTAACGTTCCATGATGCGTGCGATGAATGGTTAGAG CATTACAAGACACATTCAGGCTCGAAACCAACCACTATTAAAGAAAAGAAAAGTAATACTAATACAGTTAAAAATGCTAT TGATAGCAAAGTACTCATCAGCAAGATTACGCACACCTACTTACAAAACATCATTAATGAATGGGCTAAATCACATAGTA TTGGCCATGTTCAATCTCTTGTTATTGTTATTCGTTCCGTTTTCAAATATGCGTTTAAATATTATGATCTGCACGATATT AGTGTGTTAGATAAAATAGATATACCTAAGAAAGCCCAAACCAGAAACGAGTTTCAAGCTAAACGTAATAACTATTTAGA AGATAGCGAAGTAAAGGAGTTACTAGAGTGCTTCGACTATCTAATTAAACATAAGCGTCATGCTACGCGTAAACGTAACT ATGAAATGGTAAAAGCATTAGTAGAATTTCAAATTAACAATGGAATGCGCATTGGCGAACTCCTAGCAATCAAGACAGAC AATGTAGACGTGGAGAATAAAACACTAGAGATTGATGGCACAATTAACTGGGTTACAGATGTAGTAACTGGAGCATTTGG AGTGAAAGAAACGACTAAGACGAGTAAGAGTTATCGAACAATAGGCCTCACAGCTCAAAGTATTAATTTACTTAAAAAAC TCATGCTAGAAAATAAAAAAGAGAATCAGTGGAATGATAAATTCATAGATAGAGGTTATATATTTACTAACACTGCTGGT AGCCCTATTGACTTAAATAAGGTGAATAATATTATTAAAGAAGCTACTGATATAAGTTCAATTAACAAGCGTGTGACAAC GCACACATTACGTCACACACACATATCTACACTTGCGCAATTAGGAATTAACCTAAAAGCGATACAAGAGCGTGTAGGTC ACTCGGACTATAAAACCACCTTAGAGATATACACACATGTTACTGATAAGATGGCAAAAGATATGATGAATAAATTAGAG GGGATAGGGAGTTAG Protein sequence : MWVREITKNNSTAYRYLERYTDPLTGKYKTVSVTRNKNNVRSQKDAQLELNKIIEQRLKHYSTKQLENLTFHDACDEWLE HYKTHSGSKPTTIKEKKSNTNTVKNAIDSKVLISKITHTYLQNIINEWAKSHSIGHVQSLVIVIRSVFKYAFKYYDLHDI SVLDKIDIPKKAQTRNEFQAKRNNYLEDSEVKELLECFDYLIKHKRHATRKRNYEMVKALVEFQINNGMRIGELLAIKTD NVDVENKTLEIDGTINWVTDVVTGAFGVKETTKTSKSYRTIGLTAQSINLLKKLMLENKKENQWNDKFIDRGYIFTNTAG SPIDLNKVNNIIKEATDISSINKRVTTHTLRHTHISTLAQLGINLKAIQERVGHSDYKTTLEIYTHVTDKMAKDMMNKLE GIGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0366 | YP_039823.1 | integrase | Not tested | SaPI4 | Protein | 1e-178 | 100 |
| int | AAC28969.1 | integrase | Not tested | SaPI1 | Protein | 5e-78 | 47 |
| int | AAL04148.1 | integrase-like protein | Not tested | SaPI3 | Protein | 2e-79 | 47 |
| SAAV_0787 | YP_003281710.1 | pathogenicity island protein, integrase | Virulence | SaPIAv | Protein | 1e-78 | 47 |
| SACOL0885 | YP_185756.1 | pathogenicity island protein, integrase | Not tested | vSa1 | Protein | 3e-79 | 47 |
| int | YP_493499.1 | integrase | Not tested | SaPI5 | Protein | 2e-79 | 47 |
| SAOV_0274 | YP_005735791.1 | putative prophage integrase | Not tested | ¥ÕSa1 | Protein | 4e-65 | 42 |
