Gene Information

Name : cap1B (SAA6008_02723)
Accession : YP_005746030.1
Strain : Staphylococcus aureus JKD6008
Genome accession: NC_017341
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein Cap1B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2871398 - 2872087 bp
Length : 690 bp
Strand : -
Note : CobQ/CobB/MinD/ParA nucleotide binding domain

DNA sequence : 
ATGACGAATACACGAAGAAGTACATCAAGTTTAATTGTCCATGAACAACCAAAGTCACCTATTAGCGAGAAATTTCGAGG
CATAAGATCAAATATTATGTTTGCAAATCCTGACAGTGCAGTTCAAAGCATTGTAATCACTTCAGAGGCACCAGGCGCAG
GTAAGTCTACAATTGCAGCAAATTTAGCAGTTGCATATGCACAAGCAGGATATAAAACATTAATCGTAGACGGGGATATG
CGTAAACCTACGCAGCACTATATTTTTAATTTGCCAAATAATGAAGGCCTATCAAGTTTATTGCTAAATTGGTCAACTTA
TCAAGACAGTATTATCTCAACTGAAATTGAAGATTTAGACGTCCTGACGTCTGGACCGATTCCGCCAAATCCATCAGAGT
TAATCACATCAAGAGCATTTGCGAATTTGTATGACACATTATTGATGAATTATAACTTTGTAATTATCGATACGCCACCA
GTGAACACAGTTACAGATGCGCAATTATTTTCAAAGTTTACCGGCAATGTTGTCTACGTAGTTAATTCGGAAAATAATAA
AGATGAAGTTAAAAAAGGAAAAGAACTTATTGAAGCAACAGGTGCTAAATTATTAGGTGTAGTCTTAAATAGAATGCCTA
AAGATAAAAGTGCTAGTTACTATGCATATTATGGGACTGATGAATCATGA

Protein sequence : 
MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM
RKPTQHYIFNLPNNEGLSSLLLNWSTYQDSIISTEIEDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPP
VNTVTDAQLFSKFTGNVVYVVNSENNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-70 61
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 7e-62 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cap1B YP_005746030.1 capsular polysaccharide biosynthesis protein Cap1B VFG1298 Protein 1e-64 58