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Name : hlgB (SAA6008_02462) Accession : YP_005745783.1 Strain : Staphylococcus aureus JKD6008 Genome accession: NC_017341 Putative virulence/resistance : Virulence Product : gamma-hemolysin component C precursor, HlgB Function : - COG functional category : - COG ID : - EC number : - Position : 2578102 - 2579079 bp Length : 978 bp Strand : + Note : TIGRFAM: beta-channel forming cytolysin PFAM: Combined Leucocidin/ASH4 hemolysin KEGG: sao:SAOUHSC_02710 leukocidin F subunit precursor DNA sequence : ATGAAAATGAATAAATTAGTCAAATCATCCGTTGCTACATCTATGGCATTATTATTACTTTCTGGTACTGCTAATGCTGA AGGTAAAATAACACCAGTCAGCGTAAAAAAAGTCGATGACAAAGTTACTTTATACAAAACAACAGCCACAGCAGATTCTG ATAAATTTAAAATTTCACAGATTTTAACATTTAATTTCATCAAAGATAAAAGTTATGATAAAGATACTTTAGTACTTAAA GCTACTGGGAATATTAACTCAGGCTTTGTGAAACCTAATCCTAATGACTATGACTTTTCAAAATTATATTGGGGAGCTAA ATACAATGTATCTATAAGCTCACAATCTAATGATTCAGTAAACGTCGTTGATTATGCACCAAAAAATCAAAATGAAGAGT TTCAAGTTCAAAATACTTTAGGCTATACATTTGGTGGTGACATTAGTATCTCTAATGGTTTATCTGGTGGACTTAATGGA AATACAGCTTTTTCTGAAACAATTAATTATAAACAAGAAAGTTACAGAACAACATTAAGTCGCAACACAAATTATAAAAA TGTTGGCTGGGGAGTTGAAGCACATAAAATTATGAATAATGGTTGGGGACCTTATGGAAGAGATAGCTTCCACCCAACAT ATGGTAATGAACTCTTCTTAGCTGGCAGACAAAGCAGTGCATACGCTGGCCAAAACTTCATAGCGCAACACCAAATGCCA TTATTATCTAGAAGTAACTTCAATCCAGAATTTTTAAGCGTACTATCACACAGACAAGATGGCGCTAAAAAATCTAAAAT TACAGTAACTTATCAACGTGAAATGGATTTATACCAAATTCGTTGGAATGGCTTCTACTGGGCAGGCGCAAATTATAAAA ACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAA ACTGAAAACAATAAATAG Protein sequence : MKMNKLVKSSVATSMALLLLSGTANAEGKITPVSVKKVDDKVTLYKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLK ATGNINSGFVKPNPNDYDFSKLYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNG NTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFLAGRQSSAYAGQNFIAQHQMP LLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDLYQIRWNGFYWAGANYKNFKTRTFKSTYEIDWENHKVKLLDTKE TENNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAKOR_01767 | YP_008491955.1 | Leukocidin F subunit lukD | Virulence | vSa¥â | Protein | 2e-103 | 76 |
| lukD | NP_372343.2 | leukotoxin F-subunit | Virulence | vSa¥â | Protein | 2e-103 | 76 |
| lukD | NP_374926.1 | leukotoxin, LukD | Virulence | vSa¥â | Protein | 2e-103 | 76 |
| lukD | YP_186707.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 1e-103 | 76 |
| lukD | NP_646584.1 | leukotoxin | Virulence | vSa¥â | Protein | 1e-103 | 76 |
| lukD | YP_001332752.1 | leukocidin LukD precursor | Virulence | vSa¥â | Protein | 1e-103 | 76 |
| lukD | YP_494459.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 1e-103 | 76 |
| lukF | NP_646195.1 | Panton-Valentine leukocidin chain F precursor | Virulence | ¥ÕSa2 | Protein | 7e-92 | 73 |
| lukF-PV | YP_494078.1 | Panton-Valentine leukocidin, LukF-PV | Virulence | ¥ÕSa2 | Protein | 7e-92 | 73 |
| SAOV_1908 | YP_005737353.1 | Panton-Valentine leukocidin LukF-PV chain precursor | Virulence | ¥ÕSa3 | Protein | 1e-90 | 70 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hlgB | YP_005745783.1 | gamma-hemolysin component C precursor, HlgB | VFG1275 | Protein | 1e-130 | 100 |
| hlgB | YP_005745783.1 | gamma-hemolysin component C precursor, HlgB | VFG1276 | Protein | 3e-92 | 73 |
