|
Name : hlgA (SAA6008_02460) Accession : YP_005745781.1 Strain : Staphylococcus aureus JKD6008 Genome accession: NC_017341 Putative virulence/resistance : Virulence Product : gamma-hemolysin component A precursor, HlgA Function : - COG functional category : - COG ID : - EC number : - Position : 2575620 - 2576585 bp Length : 966 bp Strand : + Note : TIGRFAM: beta-channel forming cytolysin PFAM: Combined Leucocidin/ASH4 hemolysin KEGG: sao:SAOUHSC_02708 gamma-hemolysin h-gamma-II subunit, putative DNA sequence : ATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTT AATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAA TCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGCTATAACTCAAAACATTCAATTTGATTTTGTAAAAGATAAA AAATATAACAAAGATGCCCTAGTTGTTAAGATGCAAGGCTTCATTAGCTCTAGAACAACATATTCAGACTTAAAAAAATA TCCATATATTAAAAGAATGATATGGCCATTTCAATATAATATCAGTTTGAAAACGAAAGACTCTAATGTTGATTTAATTA ATTATCTTCCTAAAAATAAAATTGATTCAGCAGATGTTAGTCAGAAATTAGGCTATAATATCGGCGGAAACTTCCAATCA GCGCCATCAATCGGAGGCAGTGGCTCATTCAACTACTCTAAAACAATTAGTTATAATCAAAAAAACTATGTTACTGAAGT AGAAAGTCAGAACTCTAAAGGTGTTAAATGGGGAGTGAAAGCAAATTCATTCGTTACACCGAATGGTCAAGTATCTGCAT ATGATCAATACTTATTTGCACAAGACCCAACTGGTCCAGCAGCACGAGACTATTTCGTCCCAGATAATCAACTACCTCCT TTAATTCAAAGTGGCTTTAATCCATCATTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGA AATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAGACATCGTTTAGCCGTTGATAGAAAACATGATG CTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCT AAGTAA Protein sequence : MNLKLNRKKVISMIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIKRTQDITSKRLAITQNIQFDFVKDK KYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFQS APSIGGSGSFNYSKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTPNGQVSAYDQYLFAQDPTGPAARDYFVPDNQLPP LIQSGFNPSFITTLSHERGKGDKSEFEITYGRNMDATYAYVTRHRLAVDRKHDAFKNRNVTVKYEVNWKTHEVKIKSITP K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lukE | YP_186708.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 4e-106 | 71 |
| lukE | NP_646585.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 4e-106 | 71 |
| lukE | NP_372344.1 | leukotoxin S-subunit | Virulence | vSa¥â | Protein | 4e-106 | 71 |
| lukE | NP_374927.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 4e-106 | 71 |
| lukE | YP_001332753.1 | leukocidin LukE precursor | Virulence | vSa¥â | Protein | 4e-106 | 71 |
| lukE | YP_494460.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 4e-106 | 71 |
| SAKOR_01768 | YP_008491956.1 | Leukocidin S subunit lukE | Virulence | vSa¥â | Protein | 4e-106 | 71 |
| lukS | NP_646196.1 | Panton-Valentine leukocidin chain S precursor | Virulence | ¥ÕSa2 | Protein | 3e-95 | 66 |
| lukS-PV | YP_494079.1 | Panton-Valentine leukocidin, LukS-PV | Virulence | ¥ÕSa2 | Protein | 3e-95 | 66 |
| SAOV_1909 | YP_005737354.1 | leukocidin chain lukM precursor | Virulence | ¥ÕSa3 | Protein | 3e-98 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hlgA | YP_005745781.1 | gamma-hemolysin component A precursor, HlgA | VFG1273 | Protein | 4e-142 | 100 |
| hlgA | YP_005745781.1 | gamma-hemolysin component A precursor, HlgA | VFG1274 | Protein | 3e-90 | 68 |
| hlgA | YP_005745781.1 | gamma-hemolysin component A precursor, HlgA | VFG1277 | Protein | 1e-95 | 66 |
