Gene Information

Name : SA2981_0071 (SA2981_0071)
Accession : YP_005740821.1
Strain : Staphylococcus aureus 04-02981
Genome accession: NC_017340
Putative virulence/resistance : Unknown
Product : Osmosensitive K+ channel histidine kinase KdpD
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.3.-
Position : 73182 - 75815 bp
Length : 2634 bp
Strand : -
Note : -

DNA sequence :
ATTTATTTAGGCTATAGCCCAGGGGTAGGTAAAACGTATGAAATGTTATCAAATGGTATTGATCAGTATCAAGAAGGTGC
AGATATTAAAATTGGTTATATCGAACCCCATCAACGCCCTGAAACCAATGCACTGGTTCAACAATTGCCTGAAATTTCGA
CCTCCAGCCGTAAATTTGGCAGCCACACCTTTCACTATATAGATGTCTCTAAAATCATAGAAGCTAATCCAGATGTGGTC
TTAATTGATGAACTAGCACATACAAACATTTCAAAAGAGCGCCATTTAAAACGTTATAAGGATATAGAAGAAATTCTATC
GCATGGTATCGATGTCTGGACAACACTCAACATCCAACATATCGAGAGTCTAAGCGGACAAATTGCGTTAATGACAGGTA
TTCAAGTTACAGAACGTGTGCCCGACCAATTCATTACGTCAGCAGATGCCTTTGAAGTTGTGGATATTTCACCAAATATG
TTGATTCAGCGCCTTAAAGCAGGAAAAGTATATAAAAAAGAACGCTTAGAAACAGCCTTTTCTAATTTCTTTACGTATGA
AAATCTGACAGAGCTGCGTGAACTTACACTCAGAACTGTCGCAGATATTATGAGTCAAAAAGGACAACAATATAAAACTA
AACATACCGACATTACACCGCATATTGCGGTAGCTATCAGCGGCAGTATTTATAACGAACGGGTCATACGAGAAGCAAGA
CGTGCTGCCTATAAAGAACATGCTAAATTCACAGCTGTGTATATTGATGTCTTTGAGACACCGTCAGAAAGCAGAAAACA
AGATCATTATGTCCATAAAAATCTAATGCTCGCCAAAGCGTTAGGTGCAGAAATCAAAGTGTTGTATGCACAAGATATTG
CGAAAGCGTTAACCGATTGGTGTGATCTCGCTTTTGTGACGAAGCTAGTCCTTGGACAGTCAGAACAGCCACGTTGGAAA
GATTACTTTAAACAGTCACTCATTGAACAAATTAATCACGTACCACACCATTTCAAGTTAGAAATTGTACCGATTCATTA
TATTCATTCAGACAAACCTACAAATACACCTAAGCAAGCTCAAAAATCCTCTCGTTTAACTGTAGAGATTATGAAGATGC
TTGTAATTCAAACGATCTGTGTCTTGCTCGGTATATGGGTTTACAACTTAGATAAAAGCGAATCCAGTGCCATTATCTTG
CTGATGTTCTTTATCGGTATTATCGTGCTTTCTATTTGGACCCAATCCTATTTAATCGGATTCTTTGCGTCTATCTTAAA
TGTGTTTGTTTTTAATTATTTCTTTACGGTGCCAAGATTCACTTTAGAAATGTATCGCTTTGAATATCCGATTACGTTTG
CGACCAGTATTTTTGCTAGTATCTTTACGAGTGCCATCTTAAAGAATTTAAAACATCAGCATTCCTTAACAGAACGGCAG
TTATATCGGACCAATATTATGCTGCAATTTAACCAGTCCATTAAAGAATCTTATTCAATTGAACGCTTATTAAATATTGC
TGGTGATCAGATTCATCAGCTACTCAATCAGGATGTCACGGTATTCTTAATTCAAAGTAAGAAAGTCGCTGCTTCCAACT
CATTTGGAAACAGAAGCATTTCAAGCTCAGATAAGACACATGATGCTGAGACATTGAGCTGGGTCATTGAAAATGAAAGC
CGTGCCGGTAAATTAACCGATACCTTTCCTGGCAGTAAATTTTTGTGTATTCCCATTGGCACAAATCCAGTCAAAGGTGT
GATTTCTATCCGCTTCACCGACGAAACTTACATCGACACCTATGACAATTCAATATTAGACTCTATGTTGAACGATATTA
CCCTGGCAATAGAGAATGTGGATCTATTAAAACAAACCAGACAATCCATATTGAAAGCTGAACGAGAAGCCACACGTTCA
AACTTCTTGCATTCAATTTCACATGATATTAGAACACCACTGACTTCCATTATGGGCAACTTAGATATGCTGAAATACCA
TAACGAGCATTTAAACGATCAACAACAAGCAGAACTCTTAACTGCTTCTTATGGCGAAGCACAATATCTGCATACCTTAG
TCACAAATATTTTATCTTTGACTAAGTTAGAAAGCTCTGACATTCAAATACAACGCACCCCTTATTTAGTAGAAGAACTT
CTAGAAGAATTTGAAGAAGGCCTCATACGCAGACACCAAGCAAATCATGTCATTATTGAAAATGAGGATGACGCTTCACT
CATTAATATCGACAGTAAATTAATACTGCAAGTGCTATTCAACCTTATCGATAATGCTTTAAAGCATGCAGAATCACATT
CTGAAATAAAACTGCACGTTCAACATGAAACAAACAAAATAAAATTCGAAATGATAGATTGCGGAAAAGGTATTCCAGAA
GAAGAACGTCAATTGATTTTTAATCCCTATTATTCAGGAGACAACTTTAAAGACAATAAAAAAGATAGTTTGGGATTAGG
GCTCTATTTAGTACAACTCATCTTGAAACAACACAACAGTGAATTAGAATATCAACCGAATACACCACAAGGCAGTATTT
TTTATTTTTATTTGACTGTTAATCCAATTGAAATGGAGGGAGCCATGGATGAAAACAACATTATTGGTCGTTGA

Protein sequence :
MYLGYSPGVGKTYEMLSNGIDQYQEGADIKIGYIEPHQRPETNALVQQLPEISTSSRKFGSHTFHYIDVSKIIEANPDVV
LIDELAHTNISKERHLKRYKDIEEILSHGIDVWTTLNIQHIESLSGQIALMTGIQVTERVPDQFITSADAFEVVDISPNM
LIQRLKAGKVYKKERLETAFSNFFTYENLTELRELTLRTVADIMSQKGQQYKTKHTDITPHIAVAISGSIYNERVIREAR
RAAYKEHAKFTAVYIDVFETPSESRKQDHYVHKNLMLAKALGAEIKVLYAQDIAKALTDWCDLAFVTKLVLGQSEQPRWK
DYFKQSLIEQINHVPHHFKLEIVPIHYIHSDKPTNTPKQAQKSSRLTVEIMKMLVIQTICVLLGIWVYNLDKSESSAIIL
LMFFIGIIVLSIWTQSYLIGFFASILNVFVFNYFFTVPRFTLEMYRFEYPITFATSIFASIFTSAILKNLKHQHSLTERQ
LYRTNIMLQFNQSIKESYSIERLLNIAGDQIHQLLNQDVTVFLIQSKKVAASNSFGNRSISSSDKTHDAETLSWVIENES
RAGKLTDTFPGSKFLCIPIGTNPVKGVISIRFTDETYIDTYDNSILDSMLNDITLAIENVDLLKQTRQSILKAEREATRS
NFLHSISHDIRTPLTSIMGNLDMLKYHNEHLNDQQQAELLTASYGEAQYLHTLVTNILSLTKLESSDIQIQRTPYLVEEL
LEEFEEGLIRRHQANHVIIENEDDASLINIDSKLILQVLFNLIDNALKHAESHSEIKLHVQHETNKIKFEMIDCGKGIPE
EERQLIFNPYYSGDNFKDNKKDSLGLGLYLVQLILKQHNSELEYQPNTPQGSIFYFYLTVNPIEMEGAMDENNIIGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpD NP_373307.1 hypothetical protein Not tested Type-II SCCmec Protein 0.0 100
kdpD NP_370595.1 sensor protein KdpD Not tested Type-II SCCmec Protein 0.0 100
SH0032 YP_251947.1 hypothetical protein Not tested SCCmec Protein 0.0 99
kdpD YP_190032.1 sensor histidine kinase KdpD Not tested Type-II SCCmec Protein 0.0 99
SAR0069 YP_039537.1 sensor kinase Not tested Type-II SCCmec Protein 0.0 99