Gene Information

Name : hlb (SA2981_1965)
Accession : YP_005742714.1
Strain : Staphylococcus aureus 04-02981
Genome accession: NC_017340
Putative virulence/resistance : Virulence
Product : truncated beta-hemolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2082562 - 2083431 bp
Length : 870 bp
Strand : +
Note : -

DNA sequence : 
ATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGACAATATAAACGCGCTGA
TTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACA
AATTATTAAGTAATGTGAAAAAAGAATATCCTTACCAAACACCTGTACTCGGTCGTTCTCAATCAGGTTGGGACAAAACT
GAAGGTAGCTACTCATCAACTGTTGCTGAAGATGGTGGCGTAGCGATTGTAAGTAAATATCCTATTAAAGAAAAAATCCA
GCATGTTTTCAAAAGCGGTTGTGGATTCGATAATGATAGCAACAAAGGCTTTGTTTATACAAAAATAGAGAAAAATGGTA
AGAACATTCACGTTATCGGTACACATACACAATCTGAAGATTCACGTTGTGGTGCTGGACATGATCGAAAAATTAGAGCT
GAACAAATGAAAGAAATCAGTGACTTTGTTAAAAAGAAAAATATCCCTAAAGATGAAACGGTATATATAGGTGGCGACCT
TAATGTTAATAAAGGCACTCCAGAGTTCAAAGATATGCTTAAAAACTTGAATGTAAATGATGTTCTATATGCAGGTCATA
ATAGCACATGGGACCCTCAATCAAATTCAATTGCGAAATATAATTACCCTAATGGTAAACCAGAACATTTAGACTATATA
TTTACAGATAAAGATCATAAACAACCAAAACAATTAGTCAATGAAGTTGTGACTGAAAAACCTAAGCCATGGGATGTATA
TGCGTTCCCATATTACTACGTTTACAATGATTTTTCAGATCATTACCCAATCAAAGCCTATAGTAAATAG

Protein sequence : 
MRDSKPNKYCCYKVSMYPNWGQYKRADLIGQSSYIKNNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKT
EGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGCGFDNDSNKGFVYTKIEKNGKNIHVIGTHTQSEDSRCGAGHDRKIRA
EQMKEISDFVKKKNIPKDETVYIGGDLNVNKGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYI
FTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKAYSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 6e-124 99
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-131 99
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 9e-132 99
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 2e-68 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hlb YP_005742714.1 truncated beta-hemolysin VFG1798 Protein 7e-126 99
hlb YP_005742714.1 truncated beta-hemolysin VFG0674 Protein 1e-68 56