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Name : SAA6159_00056 (SAA6159_00056) Accession : YP_005738228.1 Strain : Staphylococcus aureus JKD6159 Genome accession: NC_017338 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease restriction subunit Function : - COG functional category : - COG ID : - EC number : - Position : 65886 - 69014 bp Length : 3129 bp Strand : + Note : Full length version of CDS. Saa_6159_00033 is truncated pseudogene version. DNA sequence : ATGAGCTTTCAATTTAGTGAAGATGATTTAGAACAGGTTGCACTGAAGTGGTTTGAGGGTCTTGGCTATTCTGTTAAGAA TGGTCGAGATAGTAGTGACAATGGGATTATGAATGAACGGGAGAGCGACAAAGATGTTGTGTTTGATGATCGTTTGGAAG CAGCTTTGAGACGTATTAATCCTGAACTAAATAATAGTGCAATTGAACAGGCTATGCGTGAAATTTCTATTGAGAAGTCT CCTAGTTTATTAGAGAATAATCGTTCTTTCCATGAAATGATTACTAATGGTATTGAGGTTGAACACTATAATGATGATGG TGAGACGATTAATGATTTGGTCTATGTGTTTGACTTTGATAACCCGGGAAATAATGATTTCTTAGCGGTTAATCAATTAA CTGTTGTGAATGGAGATTATAAAAAGAGACCTGATATTGTGTTATTCATAAATGGATTACCAGTAGTGGTAATTGAACTA AAGAATTCTACAAATGAATCTGTTGGTATTGAAGACGGGTATCATCAGTTAGAAACTTATAAAATGAGAATTCCACAATT ATTTAATCATAATGCAGTATTAGTAACGAGTGATGGTGTTAATACAAAAGCTGGTTCTTTAACTGCTGATTATGACCGTT TTATGACTTGGCGTACTAAAGATGGAAAAACTGAAGATTCATCAACGTTCCGTAGTTTAGATATATTGATTCACGGTATG TTAAATAAGGATGTACTATTAGATTTAATTCGTCATTTTGTTTTGTTCCAAGATGATGGTAAAGGAAATATAGTTAAAAT ATTAGCTGCATATCATCAATATTATGCAGTGAATAAAGCTATTGATCGTGCTATTGAAGCAACATCTGAACATGGTGATG GTAAAGGTGGTGTTATTTGGCACACACAAGGTTCTGGTAAGAGTTTGACAATGGTCTTCTTCTCAGGAAAGTTAATTCAA AAATTAAATAACCCGACATTAGTGGTCGTAACAGACCGTAATGACTTAGACAATCAATTGTATGGTACTTTTGTTAAGTC CAAAGGACGCTCAGGTAAAGGATTACTAAGACAGACACCTAAACAAGCTGAATCACGAAAAGAATTGAAAGAACTATTAT CTGTAGAATCAGGTGGTATCGTATTTACAACTATGCAGAAATTCGAACCTGAAGAAGGTCAAGTGACAATGGATGCATTA ACAGACCGTAAAAATGTAGTAGTTATGGCAGACGAAGCACACCGTACACAATATGGCTTCAAAGCAACTTACGATGAAAA AGGTCAAGGTATTAAATATGGTTATGCAAAATATTTAAGAGATGCTCTACCTAACGCTTCGTTCGTTGGTTTTACTGGTA CACCTGTATCTTCAACAGATAAGAATACACAAATGGTATTTGGAAATTATATTGATGTATATGATATGACACAATCTGTA GAAGACGGTAGTACGGTTAAAATATACTATGAAAGTCGTATTATTCCATTAAATTTACCAACCGATTTAGATATTGATGA AGCATATGATGTCATTACTTCTGGCCAAGAAGAAGATACTAAATCTCGATTGAAATCTAAGTGGTCACGTATAGAAGCTC TATCTGGTGCAGAACAACGTGTACATGCTTTAGCGACTGATATTATTAATCACTTTGAAACAAGACAGAAGGCAATGAAG GGTAAAGGTATGATTGTCACAATGAGTCGTCGTATTGCAGTCGATTTATATGATGAAATTGTAAGACTTAAACCTGAATG GCATTCAGATGATGATGACAAAGGTGTTATCAAAGTTGTTATGACAGGTTCATCTAGTGATCCACAAAACTTCCAAAAAC ATATAGGTCCGAAAAAGCGAAGAAACCTTTTAGAGAATCGTATGAAAGATGTTAATGATGAATTGCAACTCGTAATTGTG CGAGACATGTGGTTAACAGGATTTGATGTACCTTCAATGCATACAATGTACATAGATAAACCGATGAAAGGTCACAACTT AATGCAAGCTATTGCACGTGTTAATAGAGTATTTATAGATAAACCGGGTGGCTTAATTGTTGACTATGTAGGTATTGCTG AAAGTCTGAAGGAAGCACTAAAAGAGTATACGGACTCTGATAGAGAACAAACAGGTATAGATACAGATAAAGCGCTAGAA CTAATGTTAATGAAATACGATATCATTCAAGATATGCTATATAACCATGACTCTTCTGACTTTGAGTCAGAAGATCAATT AAATCGCTATAATGCTATCTCAAATACGATGGATTATATCATTGGATTAGGTGAGAATGAAAGAGAGCGATTTGTGACAA CAGTTACAGAACTTTCTAAGGCTTTTGCATTATGTGCAACAGAGGAAGCTGCTCAAGAACTGAATAGTGAAATTGCGTTT TTAAAAGCAGTAAAATCAGGACTTGTTAAATTATTAGCTCCACCTAGTGAAGGAAGCAAGCGTAAAAAGACACCTGCTGA AATAGAAGCAGAAATAAATCAATTGATTTCAAAGTCAGTTGTAACTGAAGAAGTTGTAGATATTTATCAAACACTCGGAA TTGAAAATCCAGATATCTCAATATTGTCGGATGATTTCTTAAAAGATGTAGAAGGACTACAGCAAAAAAATGTTGCAGTT GAATTGTTGAACAAATTACTCAAAGGACAAGTTAAGTCATTAATGAAAACTAATACTACTGTATCTAAAAGGTTTTCTGA GATGCTAAGTAAATCAATACAAAAATATAATAACCGTTCTATTGAAGCATCAAAAGTCATAGAAGAATTAATTCAAATGG CGAAAGAAATAAATCAAGAAAAAGAAAGAGGAAAAGAATTAGGTTTAAGTACTGAAGAAATTGCATTTTATGACGCATTA GCTTCACATGAAACAGCAAAAGAAGCGATGGATGATAAAGAATTAAGGGCTATTGCACATGAATTAACAAAAACGGTTAA GAATAATATGAGCGTAGACTGGTCAAAACGTGAGAGCGCAAAGGCTAAAATGAGAGTCCAAGTAAGACGACTATTAAAGA AATATGGTTATCCACCAGACTTACAAAAAATGGCAGTAGAACAAGTAGTGGAACAAGCAGAATTAATGGCAAGTCAACAA TATAAATAA Protein sequence : MSFQFSEDDLEQVALKWFEGLGYSVKNGRDSSDNGIMNERESDKDVVFDDRLEAALRRINPELNNSAIEQAMREISIEKS PSLLENNRSFHEMITNGIEVEHYNDDGETINDLVYVFDFDNPGNNDFLAVNQLTVVNGDYKKRPDIVLFINGLPVVVIEL KNSTNESVGIEDGYHQLETYKMRIPQLFNHNAVLVTSDGVNTKAGSLTADYDRFMTWRTKDGKTEDSSTFRSLDILIHGM LNKDVLLDLIRHFVLFQDDGKGNIVKILAAYHQYYAVNKAIDRAIEATSEHGDGKGGVIWHTQGSGKSLTMVFFSGKLIQ KLNNPTLVVVTDRNDLDNQLYGTFVKSKGRSGKGLLRQTPKQAESRKELKELLSVESGGIVFTTMQKFEPEEGQVTMDAL TDRKNVVVMADEAHRTQYGFKATYDEKGQGIKYGYAKYLRDALPNASFVGFTGTPVSSTDKNTQMVFGNYIDVYDMTQSV EDGSTVKIYYESRIIPLNLPTDLDIDEAYDVITSGQEEDTKSRLKSKWSRIEALSGAEQRVHALATDIINHFETRQKAMK GKGMIVTMSRRIAVDLYDEIVRLKPEWHSDDDDKGVIKVVMTGSSSDPQNFQKHIGPKKRRNLLENRMKDVNDELQLVIV RDMWLTGFDVPSMHTMYIDKPMKGHNLMQAIARVNRVFIDKPGGLIVDYVGIAESLKEALKEYTDSDREQTGIDTDKALE LMLMKYDIIQDMLYNHDSSDFESEDQLNRYNAISNTMDYIIGLGENERERFVTTVTELSKAFALCATEEAAQELNSEIAF LKAVKSGLVKLLAPPSEGSKRKKTPAEIEAEINQLISKSVVTEEVVDIYQTLGIENPDISILSDDFLKDVEGLQQKNVAV ELLNKLLKGQVKSLMKTNTTVSKRFSEMLSKSIQKYNNRSIEASKVIEELIQMAKEINQEKERGKELGLSTEEIAFYDAL ASHETAKEAMDDKELRAIAHELTKTVKNNMSVDWSKRESAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVVEQAELMASQQ YK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 82 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 81 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 81 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 46 |
