Gene Information

Name : SAA6159_00378 (SAA6159_00378)
Accession : YP_005738543.1
Strain : Staphylococcus aureus JKD6159
Genome accession: NC_017338
Putative virulence/resistance : Virulence
Product : superantigen-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 429071 - 430003 bp
Length : 933 bp
Strand : +
Note : these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation

DNA sequence : 
ATGAAAATGACAACAATTGCTAAAACAAGTTTAGCATTAGGGCTTTTAACAACAGGCGTAATCACAACGACAACGCAAGC
AGCAAACGCGACAACACCATCTTCAACTAAATTGGAAACACCGCAACCAACACCGACGTCAACTAAAACAGAGCAGTCGC
CTAAGGCTAACGCAGAAAATGTACTAGCTACTAATCCCGAACAGTCACCTAAGGCTAACGCAGAAAAAGCGACAACACCG
GCCTCAACTGATATAAAAACACCGCAATCAACACCAAACGCAACAACACCACCTTCAATTAAAGTGGAAACACCACAATC
TCCAAATACAAAACAAGTACCAACAGAAATAAACCCTAAATATAAAGATTTAAGAGCGTATTATACGAAACCAAGTTTAG
AATTTAAAAATGAGATTGGTATTATTTTAAAAAAATGGACGACAATAAGATTTATGAATATTGTTCCAGATTATTTCATA
TATAAAATAGCTTTAGTTGGAAAAGACGATAAGAAATATGGTGAAGGAGTGCATAGGCATGTCGATGCATTTATCGTTTT
AGAAGAAAAAAATAAATATGAAGTGGAAATATACTCTGTCGGTGGTATCACAAAGAGTAATAGTAAAAAAGTTGATCACA
AAGCAGGAATAAGAATTACTAAAGAAGATAATAAAGGTACAATCTCGCATGATGTTTCAGAATACAAGATTACTAAAGAA
GAGATTTCCTTGAAAGAACTTGATTTTAAATTGAGAAAACAACTTATTGAAAAACATAATCTGTACGGCAATGTTGGTTC
GGGAAAAATTGTTATTAAAATGAAAAACGGTGGAAAGTACACATTTGAATTACACAAAAAACTACAAGAACATCGCATGG
CAGACGTCATAGATGGCACTAATATTGATAGCATTGAAGTGAATATAAAATAA

Protein sequence : 
MKMTTIAKTSLALGLLTTGVITTTTQAANATTPSSTKLETPQPTPTSTKTEQSPKANAENVLATNPEQSPKANAEKATTP
ASTDIKTPQSTPNATTPPSIKVETPQSPNTKQVPTEINPKYKDLRAYYTKPSLEFKNEIGIILKKWTTIRFMNIVPDYFI
YKIALVGKDDKKYGEGVHRHVDAFIVLEEKNKYEVEIYSVGGITKSNSKKVDHKAGIRITKEDNKGTISHDVSEYKITKE
EISLKELDFKLRKQLIEKHNLYGNVGSGKIVIKMKNGGKYTFELHKKLQEHRMADVIDGTNIDSIEVNIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
set9 NP_373635.1 superantigen-like protein Virulence vSa¥á Protein 2e-106 84
SAUSA300_0398 YP_493112.1 superantigen-like protein Virulence vSa¥á Protein 1e-103 80
SAS0387 YP_042512.1 superantigen-like protein Virulence vSa¥á Protein 2e-104 80
set19 NP_645202.1 superantigen-like protein Virulence vSa¥á Protein 2e-104 80
set4nm YP_001331425.1 superantigen-like protein Virulence vSa¥á Protein 1e-103 80
SAKOR_00408 YP_008490592.1 Exotoxin Virulence vSa¥á Protein 4e-104 80
SACOL0472 YP_185362.1 superantigen-like protein Virulence vSa¥á Protein 1e-101 79
SAR0424 YP_039876.1 superantigen-like protein Virulence vSa¥á Protein 1e-99 75
SAMSHR1132_03740 YP_005324896.1 exotoxin Virulence vSa¥á Protein 1e-84 71
SAKOR_00406 YP_008490590.1 Exotoxin Virulence vSa¥á Protein 9e-83 66
SAR0425 YP_039877.1 superantigen-like protein Not tested vSa¥á Protein 3e-83 64
set18 NP_645201.1 superantigen-like protein Virulence vSa¥á Protein 5e-82 63
SAS0386 YP_042511.1 superantigen-like protein Virulence vSa¥á Protein 4e-82 63
set8 NP_370948.1 superantigen-like protein Virulence vSa¥á Protein 2e-81 63
set8 NP_373634.1 superantigen-like protein Virulence vSa¥á Protein 2e-81 63
SACOL0470 YP_185360.1 superantigen-like protein Virulence vSa¥á Protein 9e-78 61
set3nm YP_001331424.1 superantigen-like protein Virulence vSa¥á Protein 9e-78 61
SAUSA300_0397 YP_493111.1 superantigen-like protein Virulence vSa¥á Protein 9e-78 61
set6nm YP_001331427.1 superantigen-like protein Virulence vSa¥á Protein 8e-34 44
SAUSA300_0400 YP_493114.1 superantigen-like protein Virulence vSa¥á Protein 8e-34 44
SAR0423 YP_039875.1 superantigen-like protein Virulence vSa¥á Protein 7e-41 43
SAS0389 YP_042514.1 superantigen-like protein Virulence vSa¥á Protein 2e-31 42
set21 NP_645204.1 superantigen-like protein Virulence vSa¥á Protein 2e-31 42