Gene Information

Name : cap1C (SAA6159_02558)
Accession : YP_005740681.1
Strain : Staphylococcus aureus JKD6159
Genome accession: NC_017338
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein Cap1C
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2763610 - 2764377 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence : 
ATGATTGATATTCATAACCATATATTAGTTGATATAGATGATGGTCCTAAGACAATTGAAAAGAGTATTGCACTATTAAA
GCAAGCTAAGGATGAAGGTGTAACAAGTATTGTAGCGACACCTCATCATTTGCATCCGAGATATGATAATACATTTCAAC
AAGTGCTTGTGAAATTGGCGGAGTTAAGAACGCATCCAGAAGTTCAAGCATTGGATATTAAATTATTTCCCGGGCAAGAA
ATTAGAATTACAGATTCGATTCTGCAAGGCTTAGATAATGGTAGTATTCAAGGTATTAATCGTTCGAAATATTTACTAAT
TGAATTTCCAACGGGCGAAGTACCACATTATACAAAACAATTGTTTTTTGAAATACAATCGAGAGGTTACATACCAATCA
TTGCACATCCTGAAAGAAATAGAAGTATCGCCAAAAATCCGGAAATATTATATGAATTGGTTGCAAATGGGGCACTGAGT
CAATTAACATCGAGTTCTTTAGTTGGTGGATTTGGTAAAAACATTCAAAAGTTATCATTACAATTTATAGAATGTAATTT
GGCTCATTTTGTAGCTTCAGATGCACATTCATGTGACCAAAGACCATTTTTGATGCAAGAATTATTTCACAATCATAAAT
TGAAGAAATATTCGAATGATATTGAAGCATTACTTCGAAATGCCAGTTCAGTAATCAATGATAATTTTGTTTATTTAGAC
AGACCGACTAAGCCAGGAAAAGTGAAGTCGTTTTTGAAATGGTTTTAA

Protein sequence : 
MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLAELRTHPEVQALDIKLFPGQE
IRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALS
QLTSSSLVGGFGKNIQKLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD
RPTKPGKVKSFLKWF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1C AAA64642.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-73 57
SSP0062 YP_300152.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 1e-68 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cap1C YP_005740681.1 capsular polysaccharide biosynthesis protein Cap1C VFG1299 Protein 8e-65 53