Gene Information

Name : SAA6159_00024 (SAA6159_00024)
Accession : YP_005738199.1
Strain : Staphylococcus aureus JKD6159
Genome accession: NC_017338
Putative virulence/resistance : Unknown
Product : rRNA large subunit methyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 33144 - 33623 bp
Length : 480 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATCACCATTTTAGCTGTAGGGAAACTAAAAGAGAAATACTGGAAGCAAGCCATAGCAGAATATGAAAAACGTTT
AGGCCCATACACCAAGATAGACATCATAGAAGTTCCAGACGAAAAAGCACCAGAAAATATGAGCGACAAAGAAATCGAGC
AAGTAAAAGAAAAAGAAGGCCAACGAATACTAGCCAAAATCAAACCACAATCCACAGTCATTACATTAGAAATACAAGGA
AAGATGCTATCTTCCGAAGGATTGGCCCAAGAGTTGAACCATCGCATGACCCAAGGCCAAAGCGACTTTGTATTCGTTAT
TGGCGGATCAAACGGCCTGCACAAAGACATCTTACAACGCAGTAACTACGCACTATCATTCAGCAAAATGACATTCCCAC
ATCAAATGATGCGGGTTGTGTTAATTGAGCAAGTGTACAGAGCATTTAAGATTATGCGTGGAGAAGCATATCATAAATGA

Protein sequence :
MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQG
KMLSSEGLAQELNHRMTQGQSDFVFVIGGSNGLHKDILQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 4e-72 99
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 5e-72 99
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 4e-72 99
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 4e-72 99
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 4e-72 99
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 4e-72 99
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 4e-72 99
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 4e-72 99
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 4e-72 99
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 4e-72 99
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 4e-72 99
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 5e-72 99
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 9e-71 98
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 4e-69 92
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 2e-63 91
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 3e-68 91
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 3e-68 91
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 1e-66 86
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 7e-45 85