Gene Information

Name : cap5N (SAA6159_00146)
Accession : YP_005738312.1
Strain : Staphylococcus aureus JKD6159
Genome accession: NC_017338
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein Cap5N
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 164891 - 165778 bp
Length : 888 bp
Strand : +
Note : -

DNA sequence : 
ATGAGAAAAAATATTTTAATTACAGGCGTACATGGATATATCGGTAATGCTTTAAAAGATAAGCTTATTGAACAAGGACA
TCAAGTGGATCAAATTAATGTTAGGAATCAATTATGGAAGTCGACCTCGTTCAAAGGTTATGATGTTTTAATTCATACAG
CAGCTTTGGTTCACAACAATTCACCTCAAGCAAGGCTATCTGATTATATGCAAGTGAATATGTTGCTTACGAAACAATTG
GCACAAAAGGCTAAAGCTGAAGACGTTAAACAATTTATTTTTATGAGTACTATGGCAGTTTATGGAAAAGAAGGTCAGGT
TGGTAAATCAGATCAAATTGATACACAAACATCAATGAACCCTACGACCAATTATGGTATTTCCAAAAAGTTCGCTGAAC
AAGCATTACAAGAGTTGATTAGTGATTCGTTTAAAGTAGCAATTGTGAGACCACCAATGATTTATGGTGCACATTGCCCA
GGAAATTTCCAACGGTTAATGCAATTGTCAAAGCGATTGCCAATCATTCCAAATATTAACAATCAGCGCAGTGCATTATA
TATTAAACATCTGACAGCATTTGTTGATCAATTAATATCATTAGAAGTGACAGGCGTGTATCATCCTCAAGATAGTTTTT
ACTTTGATACATCGTCAGTAATGTATGAAATACGTCGCAAATCACATCGTAAAACGGTATTGATCAACATGTCTTCAATG
CTAAATAAGTATTTTAATAAGTTGTCGGTCTTTAGAAAATTATTCGGCAATTTAACATACAGCAATACGTTATATGAAAA
TAATAATGCACTTGAAGTTATTCCTGGAAAAATGTCACTTGTTATTGCGGACATTATGGATGAAACGACAACCAAAGATA
AGGCATAA

Protein sequence : 
MRKNILITGVHGYIGNALKDKLIEQGHQVDQINVRNQLWKSTSFKGYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQL
AQKAKAEDVKQFIFMSTMAVYGKEGQVGKSDQIDTQTSMNPTTNYGISKKFAEQALQELISDSFKVAIVRPPMIYGAHCP
GNFQRLMQLSKRLPIIPNINNQRSALYIKHLTAFVDQLISLEVTGVYHPQDSFYFDTSSVMYEIRRKSHRKTVLINMSSM
LNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPGKMSLVIADIMDETTTKDKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1O AAL26668.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 6e-46 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cap5N YP_005738312.1 capsular polysaccharide biosynthesis protein Cap5N VFG1310 Protein 1e-136 97