|
Name : SAA6159_01417 (SAA6159_01417) Accession : YP_005739563.1 Strain : Staphylococcus aureus JKD6159 Genome accession: NC_017338 Putative virulence/resistance : Unknown Product : pathogenicity island protein, integrase Function : - COG functional category : - COG ID : - EC number : - Position : 1558075 - 1559280 bp Length : 1206 bp Strand : + Note : identified by similarity to EGAD:72831; match to protein family HMM PF00589 DNA sequence : ATGTGGATTGAAAAATTTAAAAACAAAAATAACGAAACTAAATACAGATACTACGAGAAGTATAAAGATCCATACACAGA TAAATGGAAGCGCGTAAGTGTTGTGTTGAACAAGAATACAAAACAATCTCAAAAAGAAGCAATGTTTCGTTTAGAAGAAA AAATAAAAGAAAAACTGAACAACAAGTCGTCAAGCGAATTAAAAACTTTGACTTTTCACGCGCTATTAGATGAATGGCTT GAATATCATATAAAAACATCAGGTTCAAAGTTGACTACTCTTAATAATATAAAAATAAGAATTAGAAACATTAAACGATA CAGCTCTGAGAACTTGCTTTTAAACAAACTAGATACAAAATATATGCAGATATTTATTAATAAATTATCAGATATCTATT CTCAAAATCAAGTAACCCGTCAACTCGGAGATATGAAAGGAGCTATTAAATATGCAGTTAAATTTTACAATTATCCAAAT GAATATTTGTTAACTAATGTCAAAATTCCTAAAAGAAGAAAAACAATAGAGGATATCGAAAAAGATGAATCTAAAATGTA CAACTATTTAGAAATGAACCAAGTCCTACAGATACGTGATCATATACTAAATGATAATAAGTTACACAAGCGAAATCGCA TTTTAATTGCCAGCATCTTAGAAGTACAGGCTTTAACTGGTATGCGCATAGGAGAACTACAAGCACTGCAGGAAAAAGAT ATAGATTTATTAAACAAAACTATCAATATAACAGGTACAATTCACCGCATTAAATACGAGGAAGGATTCGGATACAAAGA CACTACAAAGACTATAAGTTCAAAAAGAAGTATCAGCATCAATTCTAGAACCGTAGAAATTTTTAAAAAGATAATACTGG AAAACAAAATGTTGAAAAGATGGAATTCGAGCTATGTTGACAGAGGGTTCATATTCACAACAAAAAAAGGGAATCCTTTA TGTAATAATCAAATCGCCGGTGTGCTTAAGAAAACTACAAAAGCTTTAAATATGAATAAGAAAGTTACCACGCACACATT TAGACATACACACATAACTTTATTAGTAGAAATGAATGTTTCTTTAAAAGCAATTATGAAAAGGGTAGGACATGTAGATG AAAAAACAACCATTCGCATATATACTCATGTAACTGAAAAAATGGATAGAGAACTAACTCAAAAACTCGAAAACATTCCA AGTTAG Protein sequence : MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRLEEKIKEKLNNKSSSELKTLTFHALLDEWL EYHIKTSGSKLTTLNNIKIRIRNIKRYSSENLLLNKLDTKYMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPN EYLLTNVKIPKRRKTIEDIEKDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKD IDLLNKTINITGTIHRIKYEEGFGYKDTTKTISSKRSISINSRTVEIFKKIILENKMLKRWNSSYVDRGFIFTTKKGNPL CNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNVSLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENIP S |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAUSA300_1438 | YP_494135.1 | phiSLT ORF401-like protein, integrase | Not tested | ¥ÕSa2 | Protein | 5e-161 | 100 |
| int | NP_646259.1 | integrase | Not tested | ¥ÕSa2 | Protein | 2e-160 | 99 |
| SAOV_0274 | YP_005735791.1 | putative prophage integrase | Not tested | ¥ÕSa1 | Protein | 3e-124 | 75 |
| int | AAC28969.1 | integrase | Not tested | SaPI1 | Protein | 1e-67 | 48 |
| int | AAL04148.1 | integrase-like protein | Not tested | SaPI3 | Protein | 7e-67 | 47 |
| SACOL0885 | YP_185756.1 | pathogenicity island protein, integrase | Not tested | vSa1 | Protein | 1e-66 | 47 |
| int | YP_493499.1 | integrase | Not tested | SaPI5 | Protein | 1e-66 | 47 |
| SAAV_0787 | YP_003281710.1 | pathogenicity island protein, integrase | Virulence | SaPIAv | Protein | 2e-65 | 46 |
