Gene Information

Name : lukF-PV (SAA6159_01353)
Accession : YP_005739501.1
Strain : Staphylococcus aureus JKD6159
Genome accession: NC_017338
Putative virulence/resistance : Virulence
Product : Panton-Valentine leukocidin chain F precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1513513 - 1514490 bp
Length : 978 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAATAGTCAAATCATCAGTTGTTACATCAATTGCATTGCTTTTGCTATCCAATACAGTTGATGCAGCTCAACA
TATCACACCTGTAAGTGAGAAAAAGGTTGATGATAAAATTACTTTGTACAAAACAACTGCAACATCAGATTCCGATAAGT
TAAAAATTTCTCAGATTTTAACTTTTAATTTTATTAAAGATAAAAGTTATGATAAAGATACATTAATACTCAAAGCTGCT
GGAAACATTTATTCTGGCTATACAAAGCCAAATCCAAAAGACACTATTAGTTCTCAATTTTATTGGGGTTCTAAGTACAA
CATTTCAATTAATTCAGATTCTAATGACTCAGTAAACGTTGTAGATTATGCACCTAAAAATCAAAATGAAGAATTTCAAG
TACAACAAACGGTAGGTTATTCTTATGGTGGAGATATTAATATCTCTAACGGCTTATCAGGTGGAGGTAATGGTTCAAAA
TCTTTTTCAGAGACAATTAACTATAAACAAGAAAGCTATAGAACTAGCTTAGATAAAAGAACTAATTTCAAAAAAATTGG
TTGGGATGTTGAAGCACATAAAATTATGAATAATGGTTGGGGACCATATGGCAGAGATAGTTATCATTCAACTTATGGTA
ATGAAATGTTTTTAGGCTCAAGACAAAGCAACTTAAATGCTGGACAAAACTTCTTGGAATATCACAAAATGCCAGTGTTA
TCCAGAGGTAACTTCAATCCAGAATTTATTGGTGTCCTATCTCGAAAACAAAACGCTGCAAAAAAATCGAAAATTACTGT
TACTTATCAAAGAGAAATGGATAGATATACAAACTTTTGGAATCAACTTCACTGGATAGGTAATAATTATAAAGATGAAA
ATAGAGCAACTCATACATCAATTTATGAAGTTGATTGGGAAAATCATACAGTTAAATTAATAGATACTCAATCTAAGGAA
AAAAATCCTATGAGCTAA

Protein sequence : 
MKKIVKSSVVTSIALLLLSNTVDAAQHITPVSEKKVDDKITLYKTTATSDSDKLKISQILTFNFIKDKSYDKDTLILKAA
GNIYSGYTKPNPKDTISSQFYWGSKYNISINSDSNDSVNVVDYAPKNQNEEFQVQQTVGYSYGGDINISNGLSGGGNGSK
SFSETINYKQESYRTSLDKRTNFKKIGWDVEAHKIMNNGWGPYGRDSYHSTYGNEMFLGSRQSNLNAGQNFLEYHKMPVL
SRGNFNPEFIGVLSRKQNAAKKSKITVTYQREMDRYTNFWNQLHWIGNNYKDENRATHTSIYEVDWENHTVKLIDTQSKE
KNPMS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lukF NP_646195.1 Panton-Valentine leukocidin chain F precursor Virulence ¥ÕSa2 Protein 4e-127 100
lukF-PV YP_494078.1 Panton-Valentine leukocidin, LukF-PV Virulence ¥ÕSa2 Protein 4e-127 100
SAKOR_01767 YP_008491955.1 Leukocidin F subunit lukD Virulence vSa¥â Protein 6e-109 84
lukD NP_372343.2 leukotoxin F-subunit Virulence vSa¥â Protein 6e-109 84
lukD NP_374926.1 leukotoxin, LukD Virulence vSa¥â Protein 6e-109 84
lukD NP_646584.1 leukotoxin Virulence vSa¥â Protein 7e-109 83
lukD YP_001332752.1 leukocidin LukD precursor Virulence vSa¥â Protein 7e-109 83
lukD YP_494459.1 leukotoxin LukD Virulence vSa¥â Protein 7e-109 83
lukD YP_186707.1 leukotoxin LukD Virulence vSa¥â Protein 7e-109 83
SAOV_1908 YP_005737353.1 Panton-Valentine leukocidin LukF-PV chain precursor Virulence ¥ÕSa3 Protein 3e-107 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lukF-PV YP_005739501.1 Panton-Valentine leukocidin chain F precursor VFG1276 Protein 2e-127 100
lukF-PV YP_005739501.1 Panton-Valentine leukocidin chain F precursor VFG1275 Protein 1e-93 73