Gene Information

Name : SAOV_2040 (SAOV_2040)
Accession : YP_005737483.1
Strain : Staphylococcus aureus ED133
Genome accession: NC_017337
Putative virulence/resistance : Virulence
Product : beta-hemolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2084033 - 2085025 bp
Length : 993 bp
Strand : +
Note : -

DNA sequence :
ATGGTGAAAAAAACAAAATCCAATTCACTAAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACT
TACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTAT
CGACGGTTTTGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGAT
GTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAATGTAAAAAAAGAATATCCTTACCA
AACACCTGTACTCGGTCGTTCTCAATCAGGTTGGGACAAAACTGAAGGTAGCTACTCATCAACTGTTGCTGAAGATGGTG
GCGTAGCGATTGTAAGTAAATATCCTATTAAAGAGAAAATCCAGCATGTTTTCAAAAGCGGTTGTGGATTCGATAATGAT
AGCAACAAAGGCTTTGTTTATACAAAAATAGAGAAAAATGGTAAGAACGTTCACGTTATCGGTACACATACACAATCTGA
AGATTCTCGTTGTGGTGCTGGACATGATCGAAAAATTAGAGCTGAACAAATGAAAGAAATCAGTGACTTTGTTAAAAAGA
AAAATATCCCTAAAGATGAAACGGTATATATAGGTGGCGACCTTAATGTTAATAAAGGCACTCCAGAGTTCAAAGATATG
CTTAAAAACTTGAATGTAAATGATGTTCTATATGCAGGTCATAATAGCACATGGGACCCTCAATCAAATTCAATTGCGAA
ATATAATTACCCTAATGGTAAACCAGAACATTTAGACTATATATTTACAGATAAAGATCATAAACAACCAAAACAATTAG
TCAATGAAGTTGTGACTGAAAAACCTAAGCCATGGGATGTATATGCTTTCCCATATTACTATGTTTACAATGATTTTTCA
GATCATTACCCAATCAAAGCCTATAGTAAATAG

Protein sequence :
MVKKTKSNSLKKVATLALANLLLVGALTDNSAKAESKKDDTDLKLVSHNVYMLSTVLYPNWGQYKRADLIGQSSYIKNND
VVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGCGFDND
SNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGAGHDRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVNKGTPEFKDM
LKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFS
DHYPIKAYSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 2e-125 99
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-124 99
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 6e-125 99
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 5e-72 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAOV_2040 YP_005737483.1 beta-hemolysin VFG1798 Protein 2e-139 100
SAOV_2040 YP_005737483.1 beta-hemolysin VFG0674 Protein 3e-72 56