|
Name : SAPIG2471 (SAPIG2471) Accession : YP_005735223.1 Strain : Staphylococcus aureus ST398 Genome accession: NC_017333 Putative virulence/resistance : Virulence Product : beta-channel forming cytolysin Function : - COG functional category : - COG ID : - EC number : - Position : 2550432 - 2551397 bp Length : 966 bp Strand : + Note : - DNA sequence : ATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTT AATCGCCCCTTTAGCCAATCCATTTACAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAA TCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGCTATAACTCAAAACATTCAATTTGATTTTGTAAAAGATAAA AAATATAACAAAGATGCCCTAGTTGTTAAAATGCAAGGATTCATCAGCTCTAGAACAACATATTCAGACTTAAAAAAATA TCCATATATTAAAAGAATGATATGGCCATTTCAATATAATATCAGTTTGAAAACGAAAGACTCTAATGTTGATTTAATCA ATTATCTTCCTAAAAATAAAATTGATTCAGCAGATGTTAGTCAGAAATTAGGCTATAATATCGGCGGAAACTTCCAATCA GCACCATCAATCGGAGGCAGTGGCTCATTCAACTACTCTAAAACAATTAGTTATAATCAAAAAAACTATGTTACTGAAGT AGAAAGTCAGAACTCTAAAGGTGTTAAATGGGGAGTGAAAGCAAATTCATTCGTTACACCGAATGGTCAAGTATCTGCAT ATGATCAATACTTATTTGCACAAGACCCAACTGGTCCAGCAGCAAGAGACTATTTCGTCCCAGATAATCAACTACCTCCT TTAATTCAAAGTGGCTTTAATCCATCATTTATTACAACATTGTCACACGAAAAAGGTAAAGGTGATAAAAGCGAGTTTGA AATCACTTACGGCAGAAACATGGATGCTACATATGCATACGTGACAAGACATCGTTTAGCCGTTGATAGAAAACATGATG CTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCT AAGTAA Protein sequence : MNLKLNRKKVISMIKNKILTATLAVGLIAPLANPFTEISKAENKIEDIGQGAEIIKRTQDITSKRLAITQNIQFDFVKDK KYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFQS APSIGGSGSFNYSKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTPNGQVSAYDQYLFAQDPTGPAARDYFVPDNQLPP LIQSGFNPSFITTLSHEKGKGDKSEFEITYGRNMDATYAYVTRHRLAVDRKHDAFKNRNVTVKYEVNWKTHEVKIKSITP K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lukE | YP_186708.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 4e-106 | 71 |
| lukE | NP_646585.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 4e-106 | 71 |
| lukE | NP_372344.1 | leukotoxin S-subunit | Virulence | vSa¥â | Protein | 4e-106 | 71 |
| lukE | NP_374927.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 4e-106 | 71 |
| lukE | YP_001332753.1 | leukocidin LukE precursor | Virulence | vSa¥â | Protein | 4e-106 | 71 |
| lukE | YP_494460.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 4e-106 | 71 |
| SAKOR_01768 | YP_008491956.1 | Leukocidin S subunit lukE | Virulence | vSa¥â | Protein | 3e-106 | 71 |
| lukS-PV | YP_494079.1 | Panton-Valentine leukocidin, LukS-PV | Virulence | ¥ÕSa2 | Protein | 2e-95 | 67 |
| lukS | NP_646196.1 | Panton-Valentine leukocidin chain S precursor | Virulence | ¥ÕSa2 | Protein | 2e-95 | 67 |
| SAOV_1909 | YP_005737354.1 | leukocidin chain lukM precursor | Virulence | ¥ÕSa3 | Protein | 2e-98 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SAPIG2471 | YP_005735223.1 | beta-channel forming cytolysin | VFG1273 | Protein | 2e-141 | 99 |
| SAPIG2471 | YP_005735223.1 | beta-channel forming cytolysin | VFG1274 | Protein | 2e-90 | 69 |
| SAPIG2471 | YP_005735223.1 | beta-channel forming cytolysin | VFG1277 | Protein | 7e-96 | 67 |
