Gene Information

Name : tnpB (SATW20_00860)
Accession : YP_005730109.1
Strain : Staphylococcus aureus TW20
Genome accession: NC_017331
Putative virulence/resistance : Unknown
Product : transposase B from transposon Tn554
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 90574 - 92403 bp
Length : 1830 bp
Strand : -
Note : -

DNA sequence :
ATGAATGAAGAAATGCAAGGGTTTTGGGCTAATAATAGTTGGGATATAAGAAAATGTCCACATCCTTCTGCCATAGAATT
AAGTAAGAATCCTGCTTTAAGAAATCGTTGGGTTCGTTTTGAACGTGTTAAAAATCTGTGGTTAAGAACAGAATTGAAAT
ATTTTTATTTTTACCATTTAAACAATGGAATATGGAATGCAAAAACTGTCTGGATTAGAAAAGGAACAGTAATTAATAAA
ATGTTGGATTTTTTAGATTTAAAGTATCCCAGCATTACTTCAATTACTGAAGTTCCTATTGATAAAGCAATGACGGAGTA
TAGAACTTATTTGACAAAACGGGGTGTTAGAATTACCACTACTAATTATAAGATTACTGCTAATCAAGAAAAAACACCTG
TAAAAGCTAATTCCTACTATGTTACTAATCTAAAACAATTTATGGAGTTTTATGAGAACTTTTATTTTGATGGAGAGGAG
TGGGATAAAGACGTTTGGGATAGACGAAACTTACCTTTGCCAGATGATAAGGTTAACCCAACACAATATGAATATACAAT
TAACTTTAAAGGGTTTCGGAATACATATTTTAAACAGCTTGTAAAAAGATATTGTAAGTTAAGATTGAACATGGATAGCT
TTTCCTATGTAAGTGATATTGCCCAAAAACTTAAAGAGTTCTTTAATTTTCTGGACATAAAGTTTAAACACGTTCAGAGA
GTACACCAATTAACGAGAGTGGAAATTGAAGCATATTTAAGTGAACTAAACATGATGGGGATAAAACCTAGTACAATAAC
TGGGAGGATCTCTATATTGGAAGGACTATTTAGTACCCTTCATAGGCTAGAATGGGATGATGTTCCTTCCAAATTATTAA
TTTATCCCGAGGACTATCCGAAAATACCAAGAGCAAAACCTCGCTTTATAGACGAATTCGTTCTAGAGCAATTGAACAGT
CATCTTGATAAATTACCCGAATATATAGCTACGATGACTATGATTGTTCAAGAATGTGGAATGAGGATAAGTGAATTGTG
CACCTTGAAAAAAGGCTGTTTATTAGAGGACAAAGATGGAGATTACTTTTTAAAGTATTATCAATGGAAAATGAAAAAGG
AGCATATAGTTCCAATATCTAAAGAGGTAGTTTTACTTATTAAAGTTCGGGAAGATAAAGTTTCAGAGGAATTTCCAGAT
AGTGAATACCTCTTTCCAAGAAAAGATGGATCGCCATTAAAACAAAAAACATTTAGAGGCGAATTAAATAAATTAGCTTA
TGAGCAAAATATAGTGGATAAATTAGGCGAGATTTATAGATTCCATGCCCATGCCTTTCGCCATTCAGTAGGAACAAGAA
TGATTAACAACGGGGTGCCCCAGCATATTGTGCAGAAATTTTTGGGACATGAAAGCCCAGAAATGACAAGCAGATACGCT
CATATCTTTGATGAAACTCTAAAAAATGAATTTACTAAATTTCAAGAAAAACTGGTTACCAATAATGGAGATGTGCTCAA
TCTAGATGATGATAGTGAAGTCGATGATGTAGAGCTTCAATGGTTCAAGAAAAATATAAATGCACAAGTGCTTCCAAATG
GTTATTGTAGATTGCCAGTAATAGCAGGTGGTTGTCCACATGCGAATGCATGCTTAGATTGCACTCACTTCTGTACCAGT
AAGCAATTCTTACCACAGCACGAAGAACAGTTAGAGCGTACAGAAGAGTTATTAACCATAGCAAAGGATAAACAATGGCA
AAGACAAATAGAGACTAATAGCCGTGTTAAAGAGCGTTTAGAACAAATCATTGGAAGTTTAACGGGGTAA

Protein sequence :
MNEEMQGFWANNSWDIRKCPHPSAIELSKNPALRNRWVRFERVKNLWLRTELKYFYFYHLNNGIWNAKTVWIRKGTVINK
MLDFLDLKYPSITSITEVPIDKAMTEYRTYLTKRGVRITTTNYKITANQEKTPVKANSYYVTNLKQFMEFYENFYFDGEE
WDKDVWDRRNLPLPDDKVNPTQYEYTINFKGFRNTYFKQLVKRYCKLRLNMDSFSYVSDIAQKLKEFFNFLDIKFKHVQR
VHQLTRVEIEAYLSELNMMGIKPSTITGRISILEGLFSTLHRLEWDDVPSKLLIYPEDYPKIPRAKPRFIDEFVLEQLNS
HLDKLPEYIATMTMIVQECGMRISELCTLKKGCLLEDKDGDYFLKYYQWKMKKEHIVPISKEVVLLIKVREDKVSEEFPD
SEYLFPRKDGSPLKQKTFRGELNKLAYEQNIVDKLGEIYRFHAHAFRHSVGTRMINNGVPQHIVQKFLGHESPEMTSRYA
HIFDETLKNEFTKFQEKLVTNNGDVLNLDDDSEVDDVELQWFKKNINAQVLPNGYCRLPVIAGGCPHANACLDCTHFCTS
KQFLPQHEEQLERTEELLTIAKDKQWQRQIETNSRVKERLEQIIGSLTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB BAC57490.1 transposaseB Not tested Type-IIIinv SCCmec Protein 0.0 99
unnamed BAB47606.1 transposase B of Transposon Tn554 Not tested Type-III SCCmec Protein 0.0 99
tnpB BAC57471.1 transposase B Not tested Type-IIIinv SCCmec Protein 0.0 98
tnpB-3 YP_190049.1 transposase B Not tested Type-II SCCmec Protein 0.0 97
tnpB BAB47666.1 transposase B(Tn554) Not tested Type-III SCCmec Protein 0.0 97
tnpB BAC53828.1 transposase B(Tn554) Not tested SRImec-III and SCCmec-III region Protein 0.0 97
tnpB BAA82202.1 transposaseB Not tested Type-II SCCmec Protein 0.0 97
tnpB1 YP_039525.1 transposase B 1 Not tested Type-II SCCmec Protein 0.0 97
tnpB NP_370579.1 transposase B Not tested Type-II SCCmec Protein 0.0 97
tnpB NP_373291.1 transposase B for Tn554 Not tested Type-II SCCmec Protein 0.0 97