Gene Information

Name : tnpB1 (SATW20_00400)
Accession : YP_005730066.1
Strain : Staphylococcus aureus TW20
Genome accession: NC_017331
Putative virulence/resistance : Unknown
Product : transposase B 1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 46204 - 48096 bp
Length : 1893 bp
Strand : +
Note : -

DNA sequence :
ATGAATGCTTCTAGTAAAAGGAAAATTATTAGTCAGAGTGAGATTAGCAAAAAAATAGCTGTAATGAATGAAGAAATGCA
AGGGTTTTGGGCTAATAATAGTTGGGATATAAGAAAATGTCCACATCCTTCTGCCATAGAATTAAGTAAGAATCCTGCTT
TAAGAAATCGTTGGGTTCGTTTTGAACGTGTTAAAAATCTGTGGTTAAGAACAGAATTGAAATATTTTTATTTTTACCAT
TTAAACAATGGAATATGGAATGCAAAAACTGTCTGGATTAGAAAAGGAACAGTAATTAATAAAATGTTGGATTTTTTAGA
TTTAAAGTATCCCAGCATTACTTCAATTACTGAAGTTCCTATTGATAAAGCAATGACGGAGTATAGAACTTATTTGACAA
AACGGGGTGTTAGAATTACCACTACTAATTATAAGATTACTGCTAATCAAGAAAAAACACCTGTAAAAGCTAATTCCTAC
TATGTTACTAATCTAAAACAATTTATGGAGTTTTATGAGAACTTTTATTTTGATGGAGAGGAGTGGGATAAAGACGTTTG
GGATAGACGAAACTTACCTTTGCCAGATGATAAGGTTAACCCAACACAATATGAATATACAATTAACTTTAAAGGGTTTC
GGAATACATATTTTAAACAGCTTGTAAAAAGATATTGTAAGTTAAGATTGAACATGGATAGCTTTTCCTATGTAAGTGAT
ATTGCCCAAAAACTTAAAGAGTTCTTTAATTTTCTGGACATAAAGTTTAAACACGTTCAGAGAGTACACCAATTAACGAG
AGTGGAAATTGAAGCATATTTAAGTGAACTAAACATGATGGGGATAAAACCTAGTACAATAACTGGGAGGATCTCTATAT
TGGAAGGACTATTTAGTACCCTTCATAGGCTAGAATGGGATGATGTTCCTTCCAAATTATTAATTTATCCCGAGGACTAT
CCGAAAATACCAAGAGCAAAACCTCGCTTTATAGACGAATTCGTTCTAGAGCAATTGAACAGTCATCTTGATAAATTACC
CGAATATATAGCTACGATGACTATGATTGTTCAAGAATGTGGAATGAGGATAAGTGAATTGTGCACCTTGAAAAAAGGCT
GTTTATTAGAGGACAAAGATGGAGATTACTTTTTAAAGTATTATCAATGGAAAATGAAAAAGGAGCATATAGTTCCAATA
TCTAAAGAGGTAGTTTTACTTATTAAAGTTCGGGAAGATAAAGTTTCAGAGGAATTTCCAGATAGTGAATACCTCTTTCC
AAGAAAAGATGGATCGCCATTAAAACAAAAAACATTTAGAGGCGAATTAAATAAATTAGCTTATGAGCAAAATATAGTGG
ATAAATTAGGCGAGATTTATAGATTCCATGCCCATGCCTTTCGCCATTCAGTAGGAACAAGAATGATTAACAACGGGGTG
CCCCAGCATATTGTGCAGAAATTTTTGGGACATGAAAGCCCAGAAATGACAAGCAGATACGCTCATATCTTTGATGAAAC
TCTAAAAAATGAATTTACTAAATTTCAAGAAAAACTGGTTACCAATAATGGAGATGTGCTCAATCTAGATGATGATAGTG
AAGTCGATGATGTAGAGCTTCAATGGTTCAAGAAAAATATAAATGCACAAGTGCTTCCAAATGGTTATTGTAGATTGCCA
GTAATAGCAGGTGGTTGTCCACATGCGAATGCATGCTTAGATTGCACTCACTTCTGTACCAGTAAGCAATTCTTACCACA
GCACGAAGAACAGTTAGAGCGTACAGAAGAGTTATTAACCATAGCAAAGGATAAACAATGGCAAAGACAAATAGAGACTA
ATAGCCGTGTTAAAGAGCGTTTAGAACAAATCATTGGAAGTTTAACGGGGTAA

Protein sequence :
MNASSKRKIISQSEISKKIAVMNEEMQGFWANNSWDIRKCPHPSAIELSKNPALRNRWVRFERVKNLWLRTELKYFYFYH
LNNGIWNAKTVWIRKGTVINKMLDFLDLKYPSITSITEVPIDKAMTEYRTYLTKRGVRITTTNYKITANQEKTPVKANSY
YVTNLKQFMEFYENFYFDGEEWDKDVWDRRNLPLPDDKVNPTQYEYTINFKGFRNTYFKQLVKRYCKLRLNMDSFSYVSD
IAQKLKEFFNFLDIKFKHVQRVHQLTRVEIEAYLSELNMMGIKPSTITGRISILEGLFSTLHRLEWDDVPSKLLIYPEDY
PKIPRAKPRFIDEFVLEQLNSHLDKLPEYIATMTMIVQECGMRISELCTLKKGCLLEDKDGDYFLKYYQWKMKKEHIVPI
SKEVVLLIKVREDKVSEEFPDSEYLFPRKDGSPLKQKTFRGELNKLAYEQNIVDKLGEIYRFHAHAFRHSVGTRMINNGV
PQHIVQKFLGHESPEMTSRYAHIFDETLKNEFTKFQEKLVTNNGDVLNLDDDSEVDDVELQWFKKNINAQVLPNGYCRLP
VIAGGCPHANACLDCTHFCTSKQFLPQHEEQLERTEELLTIAKDKQWQRQIETNSRVKERLEQIIGSLTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47606.1 transposase B of Transposon Tn554 Not tested Type-III SCCmec Protein 0.0 99
tnpB BAC57490.1 transposaseB Not tested Type-IIIinv SCCmec Protein 0.0 99
tnpB BAC57471.1 transposase B Not tested Type-IIIinv SCCmec Protein 0.0 98
tnpB NP_370579.1 transposase B Not tested Type-II SCCmec Protein 0.0 97
tnpB NP_373291.1 transposase B for Tn554 Not tested Type-II SCCmec Protein 0.0 97
tnpB-3 YP_190049.1 transposase B Not tested Type-II SCCmec Protein 0.0 97
tnpB BAB47666.1 transposase B(Tn554) Not tested Type-III SCCmec Protein 0.0 97
tnpB BAC53828.1 transposase B(Tn554) Not tested SRImec-III and SCCmec-III region Protein 0.0 97
tnpB BAA82202.1 transposaseB Not tested Type-II SCCmec Protein 0.0 97
tnpB1 YP_039525.1 transposase B 1 Not tested Type-II SCCmec Protein 0.0 97