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Name : capD (SATW20_01630) Accession : YP_005730185.1 Strain : Staphylococcus aureus TW20 Genome accession: NC_017331 Putative virulence/resistance : Virulence Product : capsular polysaccharide synthesis enzyme Function : - COG functional category : - COG ID : - EC number : - Position : 180129 - 181952 bp Length : 1824 bp Strand : + Note : - DNA sequence : ATGGCACATTTATCTGTGAAATTGCGGCTTTTAATACTAGCATTAATCGATTCACTGATAGTGACATTTTCAGTATTCGT AAGTTATTACATTTTAGAACCGTATTTCAAAACATATTCTGTCAAATTATTAATATTGGCAGCTATATCACTATTCATAT CGCATCATATTTCAGCATTTATTTTTAATATGTATCATCGAGCGTGGGAATATGCCAGTGTGAGTGAATTGATTTTAATT GTTAAAGCTGTGACGACATCTATCGTTATTACGATGGTGTTCGTGACAATTGTTACAGGCAATAGACCGTTTTTTAGGTT GTATTTAATTACTTGGATGATGCACTTGATTTTAATAGGTGGCTCAAGGTTATTTTGGCGTATTTATCGGAAATACCTTG GAGGTAAGTCATTTAATAAGAAGCCAACTTTAGTTGTTGGTGCTGGTCAAGCAGGTTCAATGCTGATTAGACAAATGTTG AAAAGTGACGAAATGAAACTTGAACCGGTATTAGCAGTCGATGATGACGAACATAAACGTAATATCACAATTACTGAGGG TGTAAAAGTCCAAGGTAAAATCGCGGATATTCCAGAACTAGTGAGGAAATATAAGATTAAAAAAATTATCATTGCAATTC CAACTATTGGTCAAGAGCGTTTGAAAGAAATTAATAATATTTGCCATATGGATGGCGTAGAGTTATTGAAAATGCCAAAT ATAGAAGACGTCATGTCTGGTGAGTTAGAAGTGAACCAACTGAAAAAAGTTGAAGTAGAAGATTTACTTGGCAGAGATCC TGTTGAATTAGATATGGATATGATATCAAATGAATTGACGAATAAAACTATTTTAGTTACGGGCGCTGGAGGTTCAATAG GATCAGAAATTTGTAGACAAGTTTGTAATTTCTATCCAGAACGTATTATTCTACTTGGCCATGGTGAAAACAGTATTTAT TTAATCAATCGTGAATTGCGAAATCGCTTCGGAAAAAATGTTGATATCGTTCCTATTATAGCGGATGTGCAAAATAGAGC GCGTATGTTTGAAATTATGGAAATGTATAAACCATACGCAGTTTATCATGCAGCAGCACACAAGCACGTGCCGTTAATGG AAGACAACCCTGAAGAAGCAGTACGTAATAATATTTTAGGTACGAAAAATACTGCTGAAGCTGCTAAAAATGCAGAGGTA AAGAAATTCGTTATGATTTCTACGGATAAAGCCGTTAATCCACCTAATGTCATGGGAGCTTCAAAGCGAATTGCAGAAAT GATTATTCAAAGTTTAAATGATGAAACGCATCGAACAAATTTTGTTGCAGTGAGATTTGGTAATGTACTTGGATCGAGAG GATCTGTGATTCCACTTTTCAAAAGTCAAATTGAAGAAGGTGGGCCAGTTACTGTGACACATCCTGAAATGACACGTTAC TTTATGACAATTCCTGAAGCTTCTAGACTAGTTTTGCAGGCAGGGGCATTAGCAGAAGGTGGCGAAGTATTTGTGTTAGA TATGGGAGAACCAGTGAAAATAGTAGATTTAGCACGAAATTTAATTAAGTTAAGTGGTAAGAAAGAAGACGATATACGCA TTACTTTTACAGGGATAAGACCTGGTGAAAAAATGTATGAAGAATTGATGAATAAGGATGAAATTCACCCTGAACAAGTA TTTGAAAAAATTTATCGTGGCAAAGTACAACATATGAAATGTAATGAAGTTGAAGCGATTATTCAAGACATCGTCAATGA CTTTAGTAAAGAAAAAATTATTAACTATGCCAATGGCAAAAAGGGAGATAATTATGTTCGATGA Protein sequence : MAHLSVKLRLLILALIDSLIVTFSVFVSYYILEPYFKTYSVKLLILAAISLFISHHISAFIFNMYHRAWEYASVSELILI VKAVTTSIVITMVFVTIVTGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNKKPTLVVGAGQAGSMLIRQML KSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPELVRKYKIKKIIIAIPTIGQERLKEINNICHMDGVELLKMPN IEDVMSGELEVNQLKKVEVEDLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMYKPYAVYHAAAHKHVPLMEDNPEEAVRNNILGTKNTAEAAKNAEV KKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTNFVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRY FMTIPEASRLVLQAGALAEGGEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITFTGIRPGEKMYEELMNKDEIHPEQV FEKIYRGKVQHMKCNEVEAIIQDIVNDFSKEKIINYANGKKGDNYVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 0.0 | 74 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-178 | 71 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capD | YP_005730185.1 | capsular polysaccharide synthesis enzyme | VFG1300 | Protein | 0.0 | 99 |
