Gene Information

Name : ccrA (SATW20_00920)
Accession : YP_005730116.1
Strain : Staphylococcus aureus TW20
Genome accession: NC_017331
Putative virulence/resistance : Unknown
Product : site-specific recombinase CcrA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 96591 - 97937 bp
Length : 1347 bp
Strand : -
Note : -

DNA sequence :
ATGAAACGAGCCATTGGTTATTTGCGCCAAAGTACAACGAAACAACAATCACTCCCAGCTCAAAAGCAAGCAATAGAATT
ATTAGCTCCAAAGCACAATATTCAAAATATCCAATACATTAGTGATAAGCAATCAGGCAGAACAGATAATCGAACAGGCT
ATCAACAAGTCACCGAACGCATCCAACAAAGACAATGTGACGTATTATGTTGTTATCGCTTGAATCGACTTCATCGCAAC
TTGAAAAATGCATTAAAACTCATGAAACTCTGTCAAAAATATCATGTTCATATTCTAAGTGTTCATGATGGCTATTTTGA
TATGGATAAAGCGTTTGATCGCCTAAAACTCAATATATTCATGAGTCTGGCTGAACTTGAATCCGATAATATTGGAGAAC
AAGTCAAAAATGGACTTAGAGAAAAGGCAAAACAAGGTAAACTCATAACGACCCATGCGCCTTTCGGTTATCACTATCAA
AATGGTACTTTCATCATTAATAATGATGAATCACCTACCGTCAAAGCTGTATTCAATTATTATCTTCAAGGATATGGCTA
CAAGAAGATTGCACAATATTTAGAAGACGATAATAAACTTATTACCCGCAAGCCTTATCAGGTACGAAATATAATTATGA
ACCCAAATTATTGTGGTCGTGTCATCAATCAATATGGTCAATATAACAATATGGTACCACCTATTGTTTCGGCAACGAAA
TATGAACATGCTCAAGCAATCCGTAATAAGAAGCAACTTCACTGTATACCTTCAGAGAATCAGCTGAAACAAAAGATCAA
ATGTCCTTGTTGTGACTCAACACTGACAAATATGACAATAAGAAAAAAACATACATTGCGATATTATATTTGTCCTAAAA
ATATGAATGAATCTCGCTTTGTCTGTTCATTCAAAGGAATAAATGCACAAAAATTAGAAGTTCAAGTCTTAGCTACATGT
CAGAACTTCTTTCAAAACCAACAGCTCTATTCAAAAATTAATAATGCAATTCATCAACGCCTCAAAAAACAAAGAGTGAT
AGAAGCTAAAAGTACGCTAACTCAAGAACAACTGATAGATAAACTTGCCAAAGGTATGATTGATGCTGAATCATTCAGAA
AACAGACTCATTTGATGAATCAAAAGCACAAAACCATATCCTCCATAAGTGATAATCAGTTACAAACATCACTACAAAAG
GTTATACAGAAAAGTTTCACGTTAAACATGCTGCATCCCTATATTGATGAAATTCGCATTACAAAAAATAAAGCCCTTGT
TGGGATCTATTTCAAAAATGAACCATTGAACATTGTGAACCAAACCTCGCAATCATCGATTGCTTAA

Protein sequence :
MKRAIGYLRQSTTKQQSLPAQKQAIELLAPKHNIQNIQYISDKQSGRTDNRTGYQQVTERIQQRQCDVLCCYRLNRLHRN
LKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIFMSLAELESDNIGEQVKNGLREKAKQGKLITTHAPFGYHYQ
NGTFIINNDESPTVKAVFNYYLQGYGYKKIAQYLEDDNKLITRKPYQVRNIIMNPNYCGRVINQYGQYNNMVPPIVSATK
YEHAQAIRNKKQLHCIPSENQLKQKIKCPCCDSTLTNMTIRKKHTLRYYICPKNMNESRFVCSFKGINAQKLEVQVLATC
QNFFQNQQLYSKINNAIHQRLKKQRVIEAKSTLTQEQLIDKLAKGMIDAESFRKQTHLMNQKHKTISSISDNQLQTSLQK
VIQKSFTLNMLHPYIDEIRITKNKALVGIYFKNEPLNIVNQTSQSSIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccrA3 BAB47596.1 cassette chromosome recombinase A3 Not tested Type-III SCCmec Protein 0.0 100
ccrA3 BAB46971.1 cassette chromosome recombinase A3 Not tested Type-IIIinv SCCmec Protein 0.0 100
ccrA1 YP_005754052.1 site-specific recombinase CcrA1 Not tested Type-XI SCCmec Protein 2e-175 81
SSP0036 YP_300126.1 cassette chromosome recombinase A Not tested SCC15305RM Protein 2e-173 80
ccrA1 BAA86648.1 cassette chromosome recombinase A1 Not tested Type-I SCCmec Protein 4e-172 79
ccrA1 BAB83486.1 site-specific recombinase Not tested SCC 12263 Protein 1e-172 79
ccrA1 YP_184952.1 cassette chromosome recombinase A1 Not tested Type-I SCCmec Protein 6e-172 79
ccrA1 YP_042166.1 site-specific recombinase Not tested SCC476 Protein 2e-172 78
ccrA YP_492758.1 cassette chromosome recombinase A Not tested Type-IV SCCmec Protein 9e-160 74
ccrA YP_039531.1 site-specific recombinase Not tested Type-II SCCmec Protein 2e-163 74
SERP2498 YP_190040.1 cassette chromosome recombinase A Not tested Type-II SCCmec Protein 2e-163 74
ccrA2 BAC67560.1 cassette chromosome recombinase A2 Not tested Type-IVc SCCmec Protein 7e-160 74
ccrA NP_644854.1 cassette chromosome recombinase A Not tested Type-IV SCCmec Protein 1e-164 74
ccrA BAB72127.1 cassette chromosome recombinase A Not tested Type-IVb SCCmec Protein 5e-164 74
SAMSHR1132_00410 YP_005324564.1 site-specific recombinase Not tested Type-IIIinv SCCmec Protein 9e-160 74
ccrA2 DAA01834.1 cassette chromosome recombinase A type 2 Not tested SCCpbp4 Protein 5e-164 73
ccrA NP_370586.1 cassette chromosome recombinase A Not tested Type-II SCCmec Protein 8e-164 73
ccrA NP_373298.1 cassette chromosome recombinase A Not tested Type-II SCCmec Protein 8e-164 73
ccrA BAB72108.1 cassette chromosome recombinase A Not tested Type-IVa SCCmec Protein 2e-162 73
SE0037 NP_763592.1 cassette chromosome recombinase A Not tested SCCpbp4 Protein 6e-164 73
ccrA BAA82194.1 site-specific recombinase Not tested Type-II SCCmec Protein 6e-164 73
ccrA4 DAA01836.1 cassette chromosome recombinase A type 4 Not tested SCCpbp4 Protein 2e-115 54
SE0057 NP_763612.1 cassette chromosome recombinase A Not tested SCCpbp4 Protein 3e-115 54