|
Name : SFxv_0954 (SFxv_0954) Accession : YP_005726525.1 Strain : Shigella flexneri 2002017 Genome accession: NC_017328 Putative virulence/resistance : Unknown Product : IS600 ORF2 Function : - COG functional category : - COG ID : - EC number : - Position : 924712 - 925503 bp Length : 792 bp Strand : + Note : - DNA sequence : ATGTGTCAGGTATTTGGTGTATCCAGGAGCGGTTATTACAACTGGGTACAGCATGAACCCTCAGACAGAAAACAAAGTGA TGAGCGGCTAAAGCTGGAGATTAAGGTGGCACATATCCGCACTCGCGAAACATATGGAACCCGGCGGCTCCAGACGGAGC TGGCAGAGAATGGCATCATCGTTGGTCGTGACCGACTGGCACGTCTTCGTAAGGAGCTGAGGCTACGCTGTAAGCAGAAA CGCAAGTTCAGAGCGACTACGAACCCGAACCACAATCTGCCAGTTGCGCCAAATCTGCTGAACCAGACGTTCGCTCCTAC AGCACCAAATCAGGTCTGGGTGGCGGACCTGACGTATGTTGCTGGCATCAAAGATGTTTATACGTGCGAAATTGTCGGCT ACGCCATGGGAGAGCGCATGACAAAAGAGCTGACAGGTAAAGCCCTGTTTATGGCGCTCAGGAGCCAGCGCCCACCTGCC GGGCTAATCCACCACTCTGATCGAGGTTCACAGTACTGCGCATACGATTACCGGGTCATACAGGAGCAGTCTGGTCTGAA AACATCAATGTCGCGTAAAGGTAACTGTTACGACAACGCTCCGATGGAAAGCTTCTGGGGAACGCTGAAAAATGAGAGCC TGAGCCACTATCGTTTTAATAACCGGGATGAAGCCATCTCAGTAATACGGGAATACATTGAGATTTTCTACAATCGTCAG CGTCGTCACTCTCGTCTGGGGAATATCTCCCCGGCAGCCTTCAGGGAAAAATATCATCAGATAGCTGCTTAA Protein sequence : MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQK RKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPA GLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQ RRHSRLGNISPAAFREKYHQIAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 1e-105 | 96 |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 6e-106 | 96 |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 2e-106 | 96 |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 2e-106 | 96 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 2e-106 | 96 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 8e-106 | 96 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 9e-107 | 96 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 1e-105 | 95 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 1e-105 | 95 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 3e-38 | 41 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-38 | 41 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-38 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SFxv_0954 | YP_005726525.1 | IS600 ORF2 | VFG1706 | Protein | 3e-106 | 96 |
