Gene Information

Name : SFxv_0751 (SFxv_0751)
Accession : YP_005726341.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : IS600 ORF2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 727233 - 728024 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence :
ATGTGTCAGGTATTTGGTGTATCCAGGAGCGGTTATTACAACTGGGTACAGCATGAACCCTCAGACAGAAAACAAAGTGA
TGAGCGGCTAAAACTGGAGATTAAGGTGGCACATATCCGCACTCGCGAAACATATGGAACCCGGCGGCTCCAGACGGAGC
TGGCAGAGAATGGCATCATCGTTGGTCGTGACCGACTTGCACGTCTTCGTAAGGAGCTGAGGCTACGCTGTAAGCAGAAA
CGCAAGTTCAGAGCGACTACGAACCCGAACCACAATCTGCCAGTTGCGCCAAATCTGCTGAACCAGACGTTCGCTCCTAC
AGCACCAAATCAGGTCTGGGTGGCGGACCTGACGTATGTTGCTGGCATCAAAGATGTTTATACGTGCGAAATTGTCGGCT
ACGCCATGGGAGAGCGCATGACAAAAGAGCTGACAGGTAAAGCCCTGTTTATGGCGCTCAGGAGCCAGCGCCCACCTGCC
GGGCTAATCCACCACTCTGATCGAGGTTCACAGTACTGCGCATACGATTACCGGGTCATACAGGAGCAGTCTGGTCTGAA
AACATCAATGTCGCGTAAAGGTAACTGTTACGACAACGCTCCGATGGAAAGCTTCTGGGGAACGCTGAAAAATGAGAGCC
TGAGCCACTATCGTTTTAATAACCGGGATGAAGCCATCTCAGTAATACGGGAATACATTGAGATTTTCTACAATCGTCAG
CGTCGTCACTCTCGTCTGGGGAATATCTCCCCGGCAGCCTTCAGGGAAAAATATCATCAGATGGCTGCTTAA

Protein sequence :
MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQK
RKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPA
GLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQ
RRHSRLGNISPAAFREKYHQMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF09030.1 unknown Not tested SHI-O Protein 7e-107 97
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 7e-107 97
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 2e-106 96
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 7e-107 96
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 4e-106 96
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 4e-106 96
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 3e-106 96
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 3e-107 96
unnamed AAF09022.1 unknown Not tested SHI-O Protein 5e-106 96
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 3e-38 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-38 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_0751 YP_005726341.1 IS600 ORF2 VFG1706 Protein 1e-106 96