Gene Information

Name : fepD (SFxv_0557)
Accession : YP_005726172.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Virulence
Product : Ferric enterobactin (Enterochelin) transport protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 538592 - 539608 bp
Length : 1017 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAGTTCGTATATCTGGTTCTGTTGCCGTGACACGCGCCATTGCCGTGCCCGGATTGCTGTTATTACTGATTATCGC
GACGGCATTAAGCCTGCTCATTGGGGCAAAATCACTCCCCGCTTCCGTAGTGCTGGAGGCCTTCTCCGGCACCTGCCAGA
GCGCCGACTGCACCATCGTGCTCGACGCGCGGCTGCCGCGTACCCTTGCCGGTTTACTGGCAGGCGGCGCGCTTGGCCTT
GCCGGGGCGTTAATGCAAACCCTCACCCGAAACCCACTTGCCGACCCCGGCTTGCTTGGCGTGAACGCCGGAGCCAGCTT
TGCCATTGTGCTGGGTGCGGCGCTGTTTGGTTACTCATCCGCACAGGAACAACTGGCGATGGCCTTCGCCGGGGCGCTGG
TGGCCTCATTGATTGTTGCCTTTACCGGCAGTCAGGGTGGAGGGCAGTTAAGTCCGGTGCGTTTAACCCTGGCGGGCGTG
GCGCTGGCGGCGGTGCTGGAAGGACTGACCAGCGGCATCGCCCTGCTTAATCCTGACGTCTACGATCAACTGCGTTTCTG
GCAAGCCGGTTCGCTGGATATTCGCAATCTACATACCTTAAAAGTGGTGCTGATCCCGGTTCTGATCGCCGGAGCAACTG
CGCTATTACTGAGTCGCGCGCTGAACAGTTTGAGCCTCGGCAGTGACACCGCGACGGCGCTGGGCAGTCGCGTGGCGCGC
ACACAGTTGATTGGTCTGCTGGCGATTACCGTGCTTTGTGGTAGTGCGACGGCGGTAGTTGGCCCGATTGCCTTTATCGG
CCTGATGATGCCGCACATGGCGCGCTGGCTGGTAGGTGCCGATCATCGCTGGTCGCTGCCCGTCACGCTACTTGCTACCC
CTGCCCTGCTGCTGTTTGCCGATATCATCGGGCGGGTGATTGTGCCCGGCGAACTGCGCGTTTCTGTGGTCAGTGCGTTT
ATTGGTGCACCGGTGCTGATCTTCCTCGTGCGACGTAAAACGCGAGGTGGTGCATGA

Protein sequence : 
MEVRISGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAFSGTCQSADCTIVLDARLPRTLAGLLAGGALGL
AGALMQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGV
ALAAVLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVAR
TQLIGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAF
IGAPVLIFLVRRKTRGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 8e-28 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 8e-28 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 8e-28 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 8e-28 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_005726172.1 Ferric enterobactin (Enterochelin) transport protein VFG0926 Protein 5e-105 99